RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 BCL10O95999 233 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 F13A1P00488 732 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRKAR2AP13861 404 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CDC25BP30305 580 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF569Q5MCW4 686 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANKFN1Q8N957 763 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 HIPK3Q9H422 1215 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGEF38Q9NXL2 777 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ENOPH1Q9UHY7 261 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 A0A087WZG4 1122 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SRGAP2O75044 1071 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CALCAP01258 141 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SRGAP2BP0DMP2 458 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ITIH1P19827 911 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 DNA2P51530 1060 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CDH6P55285 790 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PADI6Q6TGC4 694 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARMT1Q9H993 441 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRKAG2Q9UGJ0 569 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 AFF4Q9UHB7 1163 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPRE3Q9UPY8 281 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCF11O94913 1555 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CBY3A6NI87 242 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 HMOX1P09601 288 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CPA3P15088 417 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CASP4P49662 377 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC35F6Q8N357 371 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 COQ8AQ8NI60 647 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 HDAC7Q8WUI4 952 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CDCA7LQ96GN5 454 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 NACAP1Q9BZK3 213 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CABP2Q9NPB3 220 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNN4O15554 427 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 HMBSP08397 361 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 EIF3EP60228 445 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 RAB5BP61020 215 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 DEFA6Q01524 100 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIP4Q15650 581 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 DDB1Q16531 1140 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP13A4Q4VNC1 1196 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 BRMS1LQ5PSV4 323 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 WLSQ5T9L3 541 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 L3MBTL3Q96JM7 780 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CABP1Q9NZU7 370 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TSPAN4O14817 238 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 STIP1P31948 543 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC1A1P43005 524 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 MECP2P51608 486 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 CATSPER4Q7RTX7 472 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBTB8BQ8NAP8 495 aaPredicted RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 DDX54Q8TDD1 881 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 DQX1Q8TE96 717 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC25A36Q96CQ1 311 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 GGA3Q9NZ52 723 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 PCDHGA10Q9Y5H3 936 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 ALBP02768 609 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 CKMP06732 381 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 FCGR1AP12314 374 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 CYP51A1Q16850 503 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTC23Q5W5X9 447 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPBP1Q86WP2 473 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZGPATQ8N5A5 531 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 AFG1LQ8WV93 481 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 TCTEX1D2Q8WW35 142 aa6.34□□□□□ -1.4
CDC42BPA-201ENST00000334218 O00370 1275 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 TNFAIP8O95379 198 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 NR1D1P20393 614 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GUCY2DQ02846 1103 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ITGA9Q13797 1035 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTLL7Q6ZT98 887 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 TNPO1Q92973 898 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SNX21Q969T3 373 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF496Q96IT1 587 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 C8orf48Q96LL4 319 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 HGH1Q9BTY7 390 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 VPS11Q9H270 941 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DAPK2Q9UIK4 370 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GMEB2Q9UKD1 530 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 EDARQ9UNE0 448 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPIEQ9UNP9 301 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM247A6NEH6 219 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCTD19Q17RG1 926 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 LACTB2Q53H82 288 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KIF18BQ86Y91 864 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SKA3Q8IX90 412 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CDH19Q9H159 772 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CXXC1Q9P0U4 656 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GAKO14976 1311 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CIB4A0PJX0 185 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 A8MX80 341 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 H3BNX3 289 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLEC3BP05452 202 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 VAMP1P23763 118 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GNAI1P63096 354 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNM1Q05193 864 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 INPP5AQ14642 412 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms