RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PHF2O75151 1096 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP1A3P13637 1013 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF568Q3ZCX4 644 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 CNDP1Q96KN2 507 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 C17orf80Q9BSJ5 609 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SPHKAPQ2M3C7 1700 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SVOPQ8N4V2 548 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 FAM227BQ96M60 508 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 GCNAQ96QF7 691 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 DDX18Q9NVP1 670 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 FBXO9Q9UK97 447 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ARID5BQ14865 1188 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TNNI3KQ59H18 835 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SNX30Q5VWJ9 437 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 RNF219Q5W0B1 726 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TMED8Q6PL24 325 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TRAPPC11Q7Z392 1133 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TMEM110Q86TL2 294 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 APPL2Q8NEU8 664 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 EYA3Q99504 573 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 CACNA2D2Q9NY47 1150 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 FPGT-TNNI3KV9GXZ4 949 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 WDR19Q8NEZ3 1342 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 B2RBV5 119 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 KIAA1755Q5JYT7 1200 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 MAP4K1Q92918 833 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 MANSC1Q9H8J5 431 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ARF4P18085 180 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TNFRSF8P28908 595 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 PEX5P50542 639 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 FAM26FQ5R3K3 315 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TRMT2AQ8IZ69 625 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SYTL5Q8TDW5 730 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ZFAND2BQ8WV99 257 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ATXN7L3BQ96GX2 97 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 SRPK1Q96SB4 655 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 YIPF2Q9BWQ6 316 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 PABPC3Q9H361 631 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 GGT7Q9UJ14 662 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TRPM2O94759 1503 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 BCAP31P51572 246 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 NCALDP61601 193 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 NFIL3Q16649 462 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 BCORL1Q5H9F3 1711 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 CYFIP1Q7L576 1253 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ING3Q9NXR8 418 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 KRT20P35900 424 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ITGA1P56199 1179 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 USP44Q9H0E7 712 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PIGUQ9H490 435 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 RPRD1BQ9NQG5 326 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 HDAC6Q9UBN7 1215 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PTCH1Q13635 1447 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 CIITAP33076 1130 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ELF3P78545 371 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 LRRC14Q15048 493 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 SMAD1Q15797 465 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ADSSL1Q8N142 457 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 REXO4Q9GZR2 422 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 IL6P05231 212 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 HSD17B3P37058 310 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TYSND1Q2T9J0 566 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TIMM50Q3ZCQ8 353 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PIK3C3Q8NEB9 887 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 UBASH3BQ8TF42 649 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 FRMD8Q9BZ67 464 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 CCSER2Q9H7U1 834 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ENOPH1Q9UHY7 261 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 HEY1Q9Y5J3 304 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 RFX7Q2KHR2 1363 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TFAMQ00059 246 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PKN2Q16513 984 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ODR4Q5SWX8 454 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PDZK1Q5T2W1 519 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 RBM17Q96I25 401 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 NDFIP2Q9NV92 336 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TRMT6Q9UJA5 497 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ARPP19P56211 112 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 LPIN1Q14693 890 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 NR1D2Q14995 579 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 SMYD4Q8IYR2 804 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 HEXIM2Q96MH2 286 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TMBIM4Q9HC24 238 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 GTF2A1LQ9UNN4 478 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 CEP152O94986 1710 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TRAPPC3O43617 180 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 FKBP9O95302 570 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TTLL1O95922 423 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 CYP2E1P05181 493 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 FKBP9P1Q75LS8 142 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms