RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 NHEJ1Q9H9Q4 299 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 CD320Q9NPF0 282 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 GUCA1BQ9UMX6 200 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 FAM50BQ9Y247 325 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 HES2Q9Y543 173 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 TTLL13PA6NNM8 815 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 TACC1O75410 805 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 SASH3O75995 380 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 CLSTN1O94985 981 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 ITGA4P13612 1032 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 SLC11A1P49279 550 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 EHHADHQ08426 723 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 HSP90B2PQ58FF3 399 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 TMC7Q7Z402 723 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZBTB8OSQ8IWT0 167 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 KIAA0895Q8NCT3 520 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 SECISBP2LQ93073 1101 aaKnown RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 CCDC42Q96M95 316 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 CDCA3Q99618 268 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRIM6Q9C030 488 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 NDST4Q9H3R1 872 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 BLOC1S4Q9NUP1 217 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 JRKLQ9Y4A0 524 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
APOBEC3B-201ENST00000333467 NPTXRO95502 500 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 POMCP01189 267 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 CYP11B2P19099 503 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 CA8P35219 290 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 MARSP56192 900 aaKnown RBP11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 ZP2Q05996 745 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 FAM71BQ8TC56 605 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 IGSF21Q96ID5 467 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 ZFP42Q96MM3 310 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 KIFC3Q9BVG8 833 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 ZBP1Q9H171 429 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 RNF14Q9UBS8 474 aa11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.5
APOBEC3B-201ENST00000333467 CARNS1A5YM72 827 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 ARL5CA6NH57 179 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 E9PMD0 336 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 PJA2O43164 708 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 DDHD2O94830 711 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 EDN1P05305 212 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 GALTP07902 379 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 TCP1P17987 556 aaKnown RBP11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 NAMPTP43490 491 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 COASYQ13057 564 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 LLGL2Q6P1M3 1020 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 GJD3Q8N144 294 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 VPS52Q8N1B4 723 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 RNF10Q8N5U6 811 aaKnown RBP11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 DEPTORQ8TB45 409 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 LRRC15Q8TF66 581 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 PNMA5Q96PV4 448 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 GAD1Q99259 594 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 VN1R3Q9BXE9 311 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 CCDC113Q9H0I3 377 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 C2orf40Q9H1Z8 148 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 UBN1Q9NPG3 1134 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
APOBEC3B-201ENST00000333467 A0A1B0GUA9 196 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 C2orf71A6NGG8 1288 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 MYMKA6NI61 221 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 INPPL1O15357 1258 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 ATP8B3O60423 1300 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 EYA4O95677 639 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 PRKCBP05771 671 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 AARSP49588 968 aaKnown RBP eCLIP11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 SCNN1GP51170 649 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 KCNC3Q14003 757 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 PPP2R5AQ15172 486 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 FAM187BQ17R55 369 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 ADHFE1Q8IWW8 467 aa11.94□□□□□ -0.5
APOBEC3B-201ENST00000333467 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms