RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 MTM1Q13496 603 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 IZUMO3Q5VZ72 239 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 NOTUMQ6P988 496 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 LBX2Q6XYB7 198 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 KATNAL1Q9BW62 490 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 STRNO43815 780 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 PHF2O75151 1096 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 ZC3H11AO75152 810 aaKnown RBP eCLIP10.07□□□□□ -0.84e-8■■■■■ 33.3
SS18L1-201ENST00000331758 ARSEP51690 589 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 IFT88Q13099 833 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 BEND6Q5SZJ8 279 aaPredicted RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 SYCP2LQ5T4T6 812 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 MEI1Q5TIA1 1274 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 RWDD4Q6NW29 188 aaKnown RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 RAET1EQ8TD07 263 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 TNIP3Q96KP6 325 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 MLXIPLQ9NP71 852 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 RAP1GAPP47736 663 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 PDE1BQ01064 536 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 TAP1Q03518 808 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ADCY2Q08462 1091 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 HSDL1Q3SXM5 330 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 C6orf163Q5TEZ5 329 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 APPL2Q8NEU8 664 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 HNRNPLLQ8WVV9 542 aaKnown RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ZSWIM1Q9BR11 485 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 FUT8Q9BYC5 575 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 TAF1P21675 1872 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ZSCAN5CA6NGD5 496 aaPredicted RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 I3L4J1 428 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 MYO1CO00159 1063 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 GJB1P08034 283 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 RALAP11233 206 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 BMT2Q1RMZ1 405 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 GDAP1Q8TB36 358 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 CFAP36Q96G28 342 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ABHD16BQ9H3Z7 469 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ANKZF1Q9H8Y5 726 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 DPP3Q9NY33 737 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 WDR35Q9P2L0 1181 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 A0A087WUV0 522 aaPredicted RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ARHGEF37A1IGU5 675 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 KCNA4P22459 653 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 CA4P22748 312 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 NOP9Q86U38 636 aaKnown RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 SRRM1Q8IYB3 904 aaKnown RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ATG4AQ8WYN0 398 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 RUBCNQ92622 972 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ARHGEF26Q96DR7 871 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 DDX56Q9NY93 547 aaKnown RBP10.06□□□□□ -0.8
SS18L1-201ENST00000331758 TAS2R14Q9NYV8 317 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 KLHL14Q9P2G3 628 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 C4BP0C0L5 1744 aa10.06□□□□□ -0.8
SS18L1-201ENST00000331758 ITGA4P13612 1032 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF131P52739 623 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SLC12A2P55011 1212 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ARL13BQ3SXY8 428 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SLC13A5Q86YT5 568 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 C9orf72Q96LT7 481 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ERP44Q9BS26 406 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 RNF19AQ9NV58 838 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF214Q9UL59 606 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 L1RE1Q9UN81 338 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 WDR91A4D1P6 747 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ACKR2O00590 384 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF862O60290 1169 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CPT1AP50416 773 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CDH8P55286 799 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ARL4CP56559 192 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 GEN1Q17RS7 908 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CCDC38Q502W7 563 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 LRRC8CQ8TDW0 803 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 LRRC15Q8TF66 581 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CDKL2Q92772 493 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SNF8Q96H20 258 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PDGFCQ9NRA1 345 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 BTBD7Q9P203 1132 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms