RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 KCNN4O15554 427 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 MED7O43513 233 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 KRT3P12035 628 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 PRPSAP1Q14558 356 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 PKN2Q16513 984 aaKnown RBP14.77□□□□□ -0.05
EPHB3-201ENST00000330394 KCNT1Q5JUK3 1230 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 PCNX4Q63HM2 1172 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 IYDQ6PHW0 289 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 FAM71DQ8N9W8 422 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 SCG3Q8WXD2 468 aaKnown RBP14.77□□□□□ -0.05
EPHB3-201ENST00000330394 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 UBXN6Q9BZV1 441 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 GPRC5CQ9NQ84 441 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 KIAA0391O15091 583 aaKnown RBP14.77□□□□□ -0.05
EPHB3-201ENST00000330394 MSH4O15457 936 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 TLR2O60603 784 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 NFX1Q12986 1120 aaKnown RBP14.77□□□□□ -0.05
EPHB3-201ENST00000330394 ZNF699Q32M78 642 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 PDP2Q9P2J9 529 aa14.77□□□□□ -0.05
EPHB3-201ENST00000330394 CNOT7Q9UIV1 285 aaKnown RBP14.77□□□□□ -0.05
EPHB3-201ENST00000330394 TNFRSF8P28908 595 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 GEMIN4P57678 1058 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 EXOC3L1Q86VI1 746 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 GABPB2Q8TAK5 448 aaPredicted RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 TMA16Q96EY4 203 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ZCWPW1Q9H0M4 648 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 DIP2BQ9P265 1576 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 A0A0A6YYK5 440 aaPredicted RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 GRAP2O75791 330 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 CCNHP51946 323 aaPredicted RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 DSG1Q02413 1049 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 SF3B3Q15393 1217 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 HABP4Q5JVS0 413 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ATXN2LQ8WWM7 1075 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ALKBH8Q96BT7 664 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 SDCCAG3Q96C92 435 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 THAP11Q96EK4 314 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 AGO2Q9UKV8 859 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 PCDHB2Q9Y5E7 798 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ZBTB39O15060 712 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 BGNP21810 368 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 YWHABP31946 246 aaKnown RBP14.76□□□□□ -0.05
EPHB3-201ENST00000330394 DAB2IPQ5VWQ8 1189 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 PPP1R2P3Q6NXS1 205 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 GPD1LQ8N335 351 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 SPATA18Q8TC71 538 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 KAT5Q92993 513 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 EME1Q96AY2 570 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ZNF341Q9BYN7 854 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 KIAA1683Q9H0B3 1180 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 TUFT1Q9NNX1 390 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 WHRNQ9P202 907 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 GGA2Q9UJY4 613 aa14.76□□□□□ -0.05
EPHB3-201ENST00000330394 ATP4AP20648 1035 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 NCALDP61601 193 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 POU5F1BQ06416 359 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 ZNF662Q6ZS27 426 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 PRUNE1Q86TP1 453 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 RBBP8NLQ8NC74 664 aaPredicted RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 NARFQ9UHQ1 456 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 CYP11B1P15538 503 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 SSTR1P30872 391 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 HNRNPH3P31942 346 aaKnown RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 GABPAQ06546 454 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 XRCC4Q13426 336 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 RASA2Q15283 850 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 TMEM120AQ9BXJ8 343 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 MOV10L1Q9BXT6 1211 aaKnown RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 DRC3Q9H069 523 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 LRRC4BQ9NT99 713 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 LRCH1Q9Y2L9 728 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 GNGT2O14610 69 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 C11orf63Q6NUN7 778 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 CRELD2Q6UXH1 353 aaPredicted RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 ACAD11Q709F0 780 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 SCUBE1Q8IWY4 988 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 RIBC1Q8N443 379 aaPredicted RBP14.75□□□□□ -0.05
EPHB3-201ENST00000330394 COA1Q9GZY4 146 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
EPHB3-201ENST00000330394 ADRA1DP25100 572 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 PTDSS1P48651 473 aaKnown RBP14.74□□□□□ -0.05
EPHB3-201ENST00000330394 ITPK1Q13572 414 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 ACAD10Q6JQN1 1059 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 MYLK4Q86YV6 388 aaPredicted RBP14.74□□□□□ -0.05
EPHB3-201ENST00000330394 PRELID2Q8N945 189 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 FBXO36Q8NEA4 188 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 ALG3Q92685 438 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 CNBD2Q96M20 576 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
EPHB3-201ENST00000330394 DHX35Q9H5Z1 703 aaKnown RBP14.74□□□□□ -0.05
EPHB3-201ENST00000330394 TOPORSQ9NS56 1045 aaPredicted RBP14.74□□□□□ -0.05
EPHB3-201ENST00000330394 KLHL8Q9P2G9 620 aaPredicted RBP14.74□□□□□ -0.05
EPHB3-201ENST00000330394 EME2A4GXA9 379 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms