RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZNF677Q86XU0 584 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 CXorf38Q8TB03 319 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 EIF2AQ9BY44 585 aaKnown RBP21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 BUB1BO60566 1050 aaPredicted RBP21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 NKX3-2P78367 333 aa21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 PCBP1Q15365 356 aaKnown RBP eCLIP21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 PTPROQ16827 1216 aa21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 CLEC16AQ2KHT3 1053 aa21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 NME8Q8N427 588 aa21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 SCN10AQ9Y5Y9 1956 aa21.66■■□□□ 1.06
RIPPLY3-201ENST00000329553 ADAMTS4O75173 837 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 WEE2P0C1S8 567 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 UNGP13051 313 aaPredicted RBP21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 NOTUMQ6P988 496 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 DAAM2Q86T65 1068 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CHORDC1Q9UHD1 332 aaPredicted RBP21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CITO14578 2027 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 ITGB3P05106 788 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CFHP08603 1231 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 PRKAR2AP13861 404 aaKnown RBP21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CD58P19256 250 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 GNA15P30679 374 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 ASPAP45381 313 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 ZNF132P52740 706 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CRYBB1P53674 252 aaPredicted RBP21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 TMEM132DQ14C87 1099 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 RPS6KA1Q15418 735 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 RHOT2Q8IXI1 618 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 MMGT1Q8N4V1 131 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CXCL16Q9H2A7 254 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 XPNPEP3Q9NQH7 507 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CISHQ9NSE2 258 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 SNTG2Q9NY99 539 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 NXF1Q9UBU9 619 aaKnown RBP21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 POLIQ9UNA4 740 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 STXBP5LQ9Y2K9 1186 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 CASP8AP2Q9UKL3 1982 aa21.65■■□□□ 1.06
RIPPLY3-201ENST00000329553 GUCY2FP51841 1108 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 TCEAL1Q15170 157 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 ZSCAN26Q16670 478 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 SCARA5Q6ZMJ2 495 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 CCNI2Q6ZMN8 369 aaPredicted RBP21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 SYCE1Q8N0S2 351 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 CTTNBP2NLQ9P2B4 639 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 GTF2IRD1Q9UHL9 959 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 HPCAL4Q9UM19 191 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 HES2Q9Y543 173 aa21.64■■□□□ 1.06
RIPPLY3-201ENST00000329553 DNAH12Q6ZR08 3092 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 ATMINO43313 823 aaPredicted RBP21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 KIF4AO95239 1232 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 APLP1P51693 650 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 GDF6Q6KF10 455 aaPredicted RBP21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 PEX26Q7Z412 305 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 NT5DC3Q86UY8 548 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 CD99L2Q8TCZ2 262 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 TAF4BQ92750 862 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 CYFIP2Q96F07 1278 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 CFHR5Q9BXR6 569 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 SMARCAL1Q9NZC9 954 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 EHD2Q9NZN4 543 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 SRRDQ9UH36 339 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 C2CD2Q9Y426 696 aa21.64■■□□□ 1.05
RIPPLY3-201ENST00000329553 TRIP11Q15643 1979 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 CYP1A1P04798 512 aaPredicted RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 AXLP30530 894 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 SSTR3P32745 418 aaPredicted RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 HADHBP55084 474 aaKnown RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 C2orf54Q08AI8 447 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 WDR72Q3MJ13 1102 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 TAF2Q6P1X5 1199 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 APBB1IPQ7Z5R6 666 aaPredicted RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 CPA5Q8WXQ8 436 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 MS4A14Q96JA4 679 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 SYF2O95926 243 aaKnown RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 MYCNP04198 464 aaPredicted RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZNF394Q53GI3 561 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZNF667Q5HYK9 610 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZNF606Q8WXB4 792 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 KIF12Q96FN5 646 aa21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 PIN4Q9Y237 131 aaKnown RBP21.63■■□□□ 1.05
RIPPLY3-201ENST00000329553 THAP12O43422 761 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 CYP1A2P05177 515 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 ASGR1P07306 291 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 MYBL2P10244 700 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 ACTN2P35609 894 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 KCNA10Q16322 511 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 CD302Q8IX05 232 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 KLHDC9Q8NEP7 349 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 RUBCNQ92622 972 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZBTB9Q96C00 473 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZNF653Q96CK0 615 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 CELF4Q9BZC1 486 aaKnown RBP21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 PLEKHA5Q9HAU0 1116 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 DPP3Q9NY33 737 aa21.62■■□□□ 1.05
RIPPLY3-201ENST00000329553 ZMYND10O75800 440 aa21.61■■□□□ 1.05
RIPPLY3-201ENST00000329553 POLR2BP30876 1174 aaKnown RBP21.61■■□□□ 1.05
RIPPLY3-201ENST00000329553 TNNT3P45378 269 aaPredicted RBP21.61■■□□□ 1.05
RIPPLY3-201ENST00000329553 FAM47CQ5HY64 1035 aa21.61■■□□□ 1.05
RIPPLY3-201ENST00000329553 NAA35Q5VZE5 725 aa21.61■■□□□ 1.05
RIPPLY3-201ENST00000329553 NT5DC4Q86YG4 428 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms