RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 RFX1P22670 979 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 HSD17B3P37058 310 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 TNFAIP2Q03169 654 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 ENOSF1Q7L5Y1 443 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 SLC13A5Q86YT5 568 aaPredicted RBP16.96■□□□□ 0.31
SYNM-201ENST00000328642 ARHGEF2Q92974 986 aaKnown RBP16.96■□□□□ 0.31
SYNM-201ENST00000328642 GMLQ99445 158 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 ZSWIM1Q9BR11 485 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 SLITRK6Q9H5Y7 841 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 MYH3P11055 1940 aa16.96■□□□□ 0.31
SYNM-201ENST00000328642 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 RASA4BC9J798 803 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 TRIM66O15016 1216 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 RASA4O43374 803 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 MAP4K3Q8IVH8 894 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 EXOC8Q8IYI6 725 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 ABI1Q8IZP0 508 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 ZNF606Q8WXB4 792 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 AGAP3Q96P47 875 aa16.96■□□□□ 0.3
SYNM-201ENST00000328642 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 RFC5P40937 340 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 ERFP50548 548 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 NT5DC3Q86UY8 548 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 GPATCH11Q8N954 259 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 BEST2Q8NFU1 509 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 ATP6V1G3Q96LB4 118 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 FAM81BQ96LP2 452 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 IP6K2Q9UHH9 426 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 LENG1Q96BZ8 264 aaPredicted RBP16.95■□□□□ 0.3
SYNM-201ENST00000328642 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 UVRAGQ9P2Y5 699 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 STK10O94804 968 aaKnown RBP16.95■□□□□ 0.3
SYNM-201ENST00000328642 ARL4AP40617 200 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 BCAR1P56945 870 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 AMPD2Q01433 879 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 ZRSR2Q15696 482 aaKnown RBP16.95■□□□□ 0.3
SYNM-201ENST00000328642 PDIK1LQ8N165 341 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 DCLK2Q8N568 766 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 P3H4Q92791 437 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 RILPQ96NA2 401 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
SYNM-201ENST00000328642 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
SYNM-201ENST00000328642 ZNF214Q9UL59 606 aaPredicted RBP16.95■□□□□ 0.3
SYNM-201ENST00000328642 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 PPFIA4O75335 1185 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 CAPSQ13938 189 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 SLMAPQ14BN4 828 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 PWWP2AQ96N64 755 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 IRS2Q9Y4H2 1338 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 XPOTO43592 962 aaKnown RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 ADCY3O60266 1144 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 BRAFP15056 766 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 HOXD13P35453 343 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 RSPH3Q86UC2 560 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 C4orf33Q8N1A6 199 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 SMC6Q96SB8 1091 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 SNTG2Q9NY99 539 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 ZNF536O15090 1300 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 CETPP11597 493 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 GARTP22102 1010 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 GTF2BQ00403 316 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 KIAA0319LQ8IZA0 1049 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 NETO2Q8NC67 525 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 RDM1Q8NG50 284 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 FEZF2Q8TBJ5 459 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 RBM41Q96IZ5 413 aaKnown RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
SYNM-201ENST00000328642 CARD9Q9H257 536 aa16.94■□□□□ 0.3
SYNM-201ENST00000328642 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 PHF2O75151 1096 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 YY1P25490 414 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 ITGA8P53708 1063 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 PDE1BQ01064 536 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 KIF22Q14807 665 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 ALG3Q92685 438 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 SEMA4AQ9H3S1 761 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 EP400Q96L91 3159 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 ACAT1P24752 427 aaKnown RBP16.93■□□□□ 0.3
SYNM-201ENST00000328642 MSH2P43246 934 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 SP2Q02086 613 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 ARHGEF18Q6ZSZ5 1173 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 PPM1NQ8N819 430 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 PCDHB18PQ96TA0 734 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 SYT17Q9BSW7 474 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
SYNM-201ENST00000328642 WDR93Q6P2C0 686 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 RBM15Q96T37 977 aaKnown RBP eCLIP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms