RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NOP14P78316 857 aaKnown RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 EMC1Q8N766 993 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 PPM1NQ8N819 430 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 AGR3Q8TD06 166 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 TRIM55Q9BYV6 548 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 FIS1Q9Y3D6 152 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 KCPQ6ZWJ8 1503 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 H0YCG3 227 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 WNT10BO00744 389 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 RFC5P40937 340 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 RNASELQ05823 741 aaKnown RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 LAMB3Q13751 1172 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 AMHR2Q16671 573 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 RGS9BPQ6ZS82 235 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 TGFB1I1O43294 461 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 PHF2O75151 1096 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 HNRNPCP07910 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
VARS2-201ENST00000321897 VCAM1P19320 739 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CDK17Q00537 523 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 PDE1BQ01064 536 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ST13P4Q8IZP2 240 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 UBA3Q8TBC4 463 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CFAP57Q96MR6 1250 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 OSBPL8Q9BZF1 889 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 KCTD10Q9H3F6 313 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 FAM49BQ9NUQ9 324 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ACTR2P61160 394 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 MAPK7Q13164 816 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 EMC2Q15006 297 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 TRAPPC12Q8WVT3 735 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 GMCL1Q96IK5 515 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 RIT2Q99578 217 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 TEX13BQ9BXU2 312 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 WNT8AQ9H1J5 351 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 TRAF3IP3Q9Y228 551 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 KIF3CO14782 793 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 PRPSAP2O60256 369 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CNTN2Q02246 1040 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 SLC13A5Q86YT5 568 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 RHOT1Q8IXI2 618 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 PDIK1LQ8N165 341 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 SYN2Q92777 582 aaPredicted RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 CTNNAL1Q9UBT7 734 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CFLARO15519 480 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 TOM1L1O75674 476 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 CBX6O95503 412 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 SFNP31947 248 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ARFIP2P53365 341 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 MRPS35P82673 323 aaKnown RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 GABPAQ06546 454 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ALCAMQ13740 583 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
VARS2-201ENST00000321897 NT5DC3Q86UY8 548 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 ZNF280CQ8ND82 737 aa16.09■□□□□ 0.17
VARS2-201ENST00000321897 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.17
VARS2-201ENST00000321897 PHBP35232 272 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 RNF217Q8TC41 542 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 ZSWIM1Q9BR11 485 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 CENPKQ9BS16 269 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 MTMR12Q9C0I1 747 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 GANQ9H2C0 597 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 TRABDQ9H4I3 376 aa16.08■□□□□ 0.17
VARS2-201ENST00000321897 SAE1Q9UBE0 346 aaPredicted RBP16.08■□□□□ 0.17
VARS2-201ENST00000321897 DGAT1O75907 488 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 ICAM1P05362 532 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 ENO1P06733 434 aaKnown RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 PGM1P36871 562 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 ATP13A4Q4VNC1 1196 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 IRF2BP2Q7Z5L9 587 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 YTHDF3Q7Z739 585 aaKnown RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 SLC26A7Q8TE54 656 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 FAF2Q96CS3 445 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 MOV10L1Q9BXT6 1211 aaKnown RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 SHCBP1LQ9BZQ2 653 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 AJAP1Q9UKB5 411 aaPredicted RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 A6NJR5 290 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 TJP3O95049 919 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 DRD4P21917 467 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 CDH6P55285 790 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 R3HDM1Q15032 1099 aaKnown RBP16.08■□□□□ 0.16
VARS2-201ENST00000321897 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 SH2D4BQ5SQS7 431 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 C1orf186Q6ZWK4 172 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms