RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CFHP08603 1231 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 GCAP28676 217 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 FOXN2P32314 431 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 STX2P32856 288 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 MAGEA4P43358 317 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 VPS41P49754 854 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ALDH5A1P51649 535 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 SLC18A1P54219 525 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 WNT7BP56706 349 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 MGAT5Q09328 741 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 STRN3Q13033 797 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 CUL2Q13617 745 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PWP2Q15269 919 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 TDRD10Q5VZ19 366 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PHLDB2Q86SQ0 1253 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PNMA8AQ86V59 439 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 SRRM1Q8IYB3 904 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 ANKRD35Q8N283 1001 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 GIMAP7Q8NHV1 300 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 GDAP1Q8TB36 358 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 C9orf72Q96LT7 481 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 RBM15Q96T37 977 aaKnown RBP eCLIP9.23□□□□□ -0.935e-8■■■□□ 15.1
CLK1-201ENST00000321356 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 MLXIPLQ9NP71 852 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 UBN1Q9NPG3 1134 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 NKIRAS1Q9NYS0 192 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ADAM22Q9P0K1 906 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 GABBR1Q9UBS5 961 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 SCINQ9Y6U3 715 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 DOCK5Q9H7D0 1870 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PTPRJQ12913 1337 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 FAM47DPA6NHR8 397 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 MAFGO15525 162 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 LIASO43766 372 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ZBED4O75132 1171 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ASMTLO95671 621 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PIGRP01833 764 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 KCNA2P16389 499 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 CCND2P30279 289 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 LMNB2Q03252 620 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 NFX1Q12986 1120 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 NR1H3Q13133 447 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ZKSCAN8Q15776 578 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 ARHGEF16Q5VV41 709 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 MIS18BP1Q6P0N0 1132 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 RGS9BPQ6ZS82 235 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 NLRX1Q86UT6 975 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 TRABD2AQ86V40 505 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 DENND1AQ8TEH3 1009 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 KLHL29Q96CT2 875 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 IFT74Q96LB3 600 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 FAM118BQ9BPY3 351 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 APOBEC3GQ9HC16 384 aaKnown RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
CLK1-201ENST00000321356 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
CLK1-201ENST00000321356 RLFQ13129 1914 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 RASA4BC9J798 803 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 DNALI1O14645 258 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 PRPF4O43172 522 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLK1-201ENST00000321356 RASA4O43374 803 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 RGS20O76081 388 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 KRT16P08779 473 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 CD58P19256 250 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 GNA15P30679 374 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 PTPN7P35236 360 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 PIK3CAP42336 1068 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 ZNF132P52740 706 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 NLRP11P59045 1033 aaKnown RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 IL9RQ01113 521 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 RASA2Q15283 850 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 P3H1Q32P28 736 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 ACCSLQ4AC99 568 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 LRRC38Q5VT99 294 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 LMBRD2Q68DH5 695 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 SPOPLQ6IQ16 392 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 SEPT14Q6ZU15 432 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 ECHDC2Q86YB7 292 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 RCOR2Q8IZ40 523 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 AGAP11Q8TF27 550 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 N4BP2L2Q92802 583 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 STAMBPL1Q96FJ0 436 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 BICD1Q96G01 975 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 CFAP57Q96MR6 1250 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 TTC25Q96NG3 672 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 FNBP1Q96RU3 617 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 HAPLN2Q9GZV7 340 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 POLR3FQ9H1D9 316 aaPredicted RBP9.22□□□□□ -0.93
CLK1-201ENST00000321356 CYP26B1Q9NR63 512 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
CLK1-201ENST00000321356 PARVAQ9NVD7 372 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms