RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 B2RBV5 119 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 KCNQ3O43525 872 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 TMC5Q6UXY8 1006 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 PAPOLBQ9NRJ5 636 aaKnown RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 APEX2Q9UBZ4 518 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 EEPD1Q7L9B9 569 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 HERC5Q9UII4 1024 aaKnown RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 BFSP2Q13515 415 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 RIC8BQ9NVN3 520 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 ADAM30Q9UKF2 790 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 EVPLLA8MZ36 301 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 PSMC6P62333 389 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 C3orf62Q6ZUJ4 267 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF786Q8N393 782 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 TRIM63Q969Q1 353 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 MYH11P35749 1972 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 ADGRA2Q96PE1 1338 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 TRIM24O15164 1050 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 SPRP35270 261 aaPredicted RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 TRIM25Q14258 630 aaKnown RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 PPP3CCP48454 512 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 ACCSLQ4AC99 568 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 ASZ1Q8WWH4 475 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 VPS33BQ9H267 617 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 GRID1Q9ULK0 1009 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 ATP9BO43861 1147 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 SCP2P22307 547 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CASP1P29466 404 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 BTKQ06187 659 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 QARSP47897 775 aaKnown RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 PLEKHA5Q9HAU0 1116 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 FANCEQ9HB96 536 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 DYRK4Q9NR20 520 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CNGA2Q16280 664 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CLEC17AQ6ZS10 378 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 ARHGEF3Q9NR81 526 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 USP17L5A8MUK1 530 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 RALAP11233 206 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 HNRNPH1P31943 449 aaKnown RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 NCKAP1LP55160 1127 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 MAPRE1Q15691 268 aaKnown RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 SMAD1Q15797 465 aaKnown RBP17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 KIZQ2M2Z5 673 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 TUBGCP4Q9UGJ1 667 aa17.64■□□□□ 0.41
SMCHD1-201ENST00000320876 CAPZA2P47755 286 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 KRT84Q9NSB2 600 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 NDUFS3O75489 264 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 ASNSP08243 561 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 GEMIN4P57678 1058 aaKnown RBP17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 C4orf33Q8N1A6 199 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 C19orf18Q8NEA5 215 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 POLIQ9UNA4 740 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 PSMD14O00487 310 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 SNRPAP09012 282 aaKnown RBP17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 ADORA2BP29275 332 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.418e-8■■■□□ 18.8
SMCHD1-201ENST00000320876 SESN2P58004 480 aaPredicted RBP17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■□□□□ 8.4
SMCHD1-201ENST00000320876 PID1Q7Z2X4 250 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 C18orf8Q96DM3 657 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 CD274Q9NZQ7 290 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 TEX33O43247 280 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 SLC26A4O43511 780 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 HES6Q96HZ4 224 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 DEPDC7Q96QD5 511 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 TIPINQ9BVW5 301 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 SMARCAL1Q9NZC9 954 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 NUDT2P50583 147 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 CCDC149Q6ZUS6 474 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 SERPINB12Q96P63 405 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 PKP3Q9Y446 797 aa17.63■□□□□ 0.41
SMCHD1-201ENST00000320876 PKN2Q16513 984 aaKnown RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SPATA18Q8TC71 538 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 ECSITQ9BQ95 431 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SSU72P8A0A1W2PR75 194 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 IRAK1P51617 712 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 ZBTB10Q96DT7 871 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 ZNF560Q96MR9 790 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 WDR35Q9P2L0 1181 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 LCP1P13796 627 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 GTF2H3Q13889 308 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 PTGISQ16647 500 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SHCBP1Q8NEM2 672 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SLC7A5P2Q9GIP4 190 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 CAAP1Q9H8G2 361 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 CHMP2BQ9UQN3 213 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 MLNP12872 115 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 MCAMP43121 646 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SF3B3Q15393 1217 aaKnown RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms