RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 EIF1ADQ8N9N8 165 aaKnown RBP8.07□□□□□ -1.12
IFT88-201ENST00000319980 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.07□□□□□ -1.12
IFT88-201ENST00000319980 TRIM11Q96F44 468 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 CDT1Q9H211 546 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
IFT88-201ENST00000319980 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
IFT88-201ENST00000319980 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
IFT88-201ENST00000319980 CISHQ9NSE2 258 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 TNFSF13BQ9Y275 285 aa8.07□□□□□ -1.12
IFT88-201ENST00000319980 OPA1O60313 960 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PPFIA4O75335 1185 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 TNNC2P02585 160 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CAPN2P17655 700 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 TMOD1P28289 359 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 FLT3P36888 993 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PHKA2P46019 1235 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ZNF699Q32M78 642 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ZNF484Q5JVG2 852 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 LIN9Q5TKA1 542 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 TRIM72Q6ZMU5 477 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SLC13A5Q86YT5 568 aaPredicted RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 TMEM130Q8N3G9 435 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ARL8AQ96BM9 186 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ANKRD36BP1Q96IX9 119 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SCLT1Q96NL6 688 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ERP44Q9BS26 406 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 C16orf70Q9BSU1 422 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 RAB17Q9H0T7 212 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 GBA2Q9HCG7 927 aaPredicted RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 PRMT7Q9NVM4 692 aaPredicted RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 MAGEB2O15479 319 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PHF2O75151 1096 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 GJB6O95452 261 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CTNNA2P26232 953 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MAMLD1Q13495 774 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 KCTD16Q68DU8 428 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CCDC137Q6PK04 289 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 JAMLQ86YT9 394 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MREGQ8N565 214 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PIK3R5Q8WYR1 880 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SEC14L1Q92503 715 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CPB2Q96IY4 423 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PTPN18Q99952 460 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SH3GL2Q99962 352 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PLVAPQ9BX97 442 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 XYLT2Q9H1B5 865 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 GINS2Q9Y248 185 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SLC45A1Q9Y2W3 748 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MCM3APO60318 1980 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 UNCXA6NJT0 531 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 TLR3O15455 904 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 B4GALT4O60513 344 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CELF2O95319 508 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 STAG3L1P0CL83 205 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 RARAP10276 462 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SMPD1P17405 629 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CHRNA3P32297 505 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 HSPA9P38646 679 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 SSR1P43307 286 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 KCNJ1P48048 391 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PPFIA1Q13136 1202 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 DHX34Q14147 1143 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 WDR72Q3MJ13 1102 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 DNAJC21Q5F1R6 531 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 TTC27Q6P3X3 843 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 ANKRD23Q86SG2 305 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 CCDC105Q8IYK2 499 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 FAM76AQ8TAV0 307 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 NFKBIZQ9BYH8 718 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 KATNBL1Q9H079 304 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MRPL47Q9HD33 250 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 FAM114A2Q9NRY5 505 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
IFT88-201ENST00000319980 PSD3Q9NYI0 1048 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 MORF4L1Q9UBU8 362 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 PTPN22Q9Y2R2 807 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 SNX24Q9Y343 169 aa8.06□□□□□ -1.12
IFT88-201ENST00000319980 O00370 1275 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 NFICP08651 508 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 HSD17B3P37058 310 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 SLC1A1P43005 524 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 ZNF132P52740 706 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 DUPD1Q68J44 220 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PHF13Q86YI8 300 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 C2orf69Q8N8R5 385 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 UBLCP1Q8WVY7 318 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 LRRC45Q96CN5 670 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 VCPIP1Q96JH7 1222 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PLAAQ9Y263 795 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.05□□□□□ -1.12
IFT88-201ENST00000319980 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms