RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 HSMCR30P0CW71 290 aa13.77□□□□□ -0.2
AFF3-201ENST00000317233 LRRC63Q05C16 580 aa13.77□□□□□ -0.2
AFF3-201ENST00000317233 RBL2Q08999 1139 aa13.77□□□□□ -0.2
AFF3-201ENST00000317233 DALRD3Q5D0E6 543 aaKnown RBP13.77□□□□□ -0.2
AFF3-201ENST00000317233 CDC73Q6P1J9 531 aa13.77□□□□□ -0.2
AFF3-201ENST00000317233 BNIPLQ7Z465 357 aa13.77□□□□□ -0.2
AFF3-201ENST00000317233 GRK4P32298 578 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 KLC1Q07866 573 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 GALNT4Q8N4A0 578 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 NLNQ9BYT8 704 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 APRTP07741 180 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 ETNK1Q9HBU6 452 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 CITO14578 2027 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 SKP1P63208 163 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.21
AFF3-201ENST00000317233 POLD3Q15054 466 aaPredicted RBP13.77□□□□□ -0.21
AFF3-201ENST00000317233 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 OTOAQ7RTW8 1153 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 TRIM43BA6NCK2 446 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 A8MXQ7 604 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 SCNN1BP51168 640 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 ZRANB3Q5FWF4 1079 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 ALKBH2Q6NS38 261 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
AFF3-201ENST00000317233 TBCKQ8TEA7 893 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 SPACA7Q96KW9 195 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 AGAP3Q96P47 875 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 SNX6Q9UNH7 406 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 V9GYQ6 96 aa13.77□□□□□ -0.21
AFF3-201ENST00000317233 UPP2O95045 317 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 CDH6P55285 790 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 SESN2P58004 480 aaPredicted RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.76□□□□□ -0.21
AFF3-201ENST00000317233 TRAP1Q12931 704 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 GYS1P13807 737 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 GYG1P46976 350 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PACS1Q6VY07 963 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 SH3BP4Q9P0V3 963 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 ZNF839A8K0R7 811 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 EIF2AK2P19525 551 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 PCSK7Q16549 785 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PYHIN1Q6K0P9 492 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 THUMPD3Q9BV44 507 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 VTA1Q9NP79 307 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 IQCMA0A1B0GVH7 501 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PCDHB7Q9Y5E2 793 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 ABCC4O15439 1325 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 LCA5LO95447 670 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 IL12RB1P42701 662 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 UBA2Q9UBT2 640 aaPredicted RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
AFF3-201ENST00000317233 XDHP47989 1333 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 B2RBV5 119 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 P3H1Q32P28 736 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PARVAQ9NVD7 372 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
AFF3-201ENST00000317233 STX7O15400 261 aaKnown RBP13.75□□□□□ -0.21
AFF3-201ENST00000317233 LYNP07948 512 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 MAGOHP61326 146 aaKnown RBP13.75□□□□□ -0.21
AFF3-201ENST00000317233 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
AFF3-201ENST00000317233 CCNIQ14094 377 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 NOL9Q5SY16 702 aaKnown RBP13.75□□□□□ -0.21
AFF3-201ENST00000317233 TMC4Q7Z404 712 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 WDR60Q8WVS4 1066 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 XPO7Q9UIA9 1087 aaKnown RBP13.75□□□□□ -0.21
AFF3-201ENST00000317233 TRIM64A6NGJ6 449 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 LRG1P02750 347 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 PEX5P50542 639 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 LGALS3BPQ08380 585 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
AFF3-201ENST00000317233 SNF8Q96H20 258 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms