RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 PCDHB18PQ96TA0 734 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 ZSWIM1Q9BR11 485 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 TMBIM4Q9HC24 238 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 KIAA1586Q9HCI6 787 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 UVRAGQ9P2Y5 699 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 STYXL1Q9Y6J8 313 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 K7ERI5 159 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 HNRNPDLO14979 420 aaKnown RBP15.14■□□□□ 0.01
VRK3-201ENST00000316763 ASAP2O43150 1006 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.01
VRK3-201ENST00000316763 CYP1A2P05177 515 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 CYP11B1P15538 503 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 NKX3-2P78367 333 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 FMO1Q01740 532 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 STRN3Q13033 797 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 MESDQ14696 234 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 GRIK4Q16099 956 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 GNASQ5JWF2 1037 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 SPDYCQ5MJ68 293 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 FOXR1Q6PIV2 292 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 EFCAB13Q8IY85 973 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 ARFGAP2Q8N6H7 521 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 KLHDC9Q8NEP7 349 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 HELQQ8TDG4 1101 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 UBLCP1Q8WVY7 318 aaPredicted RBP15.14■□□□□ 0.01
VRK3-201ENST00000316763 ALG3Q92685 438 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 DEFB118Q96PH6 123 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 CELF4Q9BZC1 486 aaKnown RBP15.14■□□□□ 0.01
VRK3-201ENST00000316763 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
VRK3-201ENST00000316763 HAS3O00219 553 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 MMEP08473 750 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 COMTP21964 271 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 CHRNA3P32297 505 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 GBP1P32455 592 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 CLCN3P51790 818 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 IGBP1P78318 339 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 POU5F1BQ06416 359 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 ZNF211Q13398 564 aaPredicted RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 BIRC3Q13489 604 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 SH2D3CQ8N5H7 860 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 RNF149Q8NC42 400 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 ZNF564Q8TBZ8 553 aaPredicted RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 RUNDC3BQ96NL0 473 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 ERP44Q9BS26 406 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 NUP85Q9BW27 656 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 NFKBIZQ9BYH8 718 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 FAM107BQ9H098 131 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 NEUROG2Q9H2A3 272 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 DPH5Q9H2P9 285 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.013e-6■■■■■ 88.5
VRK3-201ENST00000316763 RRN3P2A6NIE6 340 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 SPOPO43791 374 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 PHF2O75151 1096 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 DRG2P55039 364 aaKnown RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 SV2AQ7L0J3 742 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 TMC3Q7Z5M5 1100 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 ADAT2Q7Z6V5 191 aaKnown RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 RHPN2Q8IUC4 686 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 BCAS4Q8TDM0 211 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 FMO2Q99518 471 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 POP1Q99575 1024 aaKnown RBP15.13■□□□□ 0.01
VRK3-201ENST00000316763 C2orf40Q9H1Z8 148 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 MTUS1Q9ULD2 1270 aa15.13■□□□□ 0.01
VRK3-201ENST00000316763 BRCA2P51587 3418 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 FAM170AA1A519 330 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 H0YGN5 161 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 GJB1P08034 283 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 SRGAP2CP0DJJ0 459 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 CTNNA2P26232 953 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 GCNT1Q02742 428 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
VRK3-201ENST00000316763 TFDP1Q14186 410 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 MFSD10Q14728 455 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 UAP1Q16222 522 aaPredicted RBP15.12■□□□□ 0.01
VRK3-201ENST00000316763 KCNA10Q16322 511 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 DUPD1Q68J44 220 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 ACAD10Q6JQN1 1059 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 TAS1R2Q8TE23 839 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 TRIM51Q9BSJ1 452 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 C1orf112Q9NSG2 853 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 NR2E1Q9Y466 385 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 NFS1Q9Y697 457 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 GRIN2DO15399 1336 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 NRCAMQ92823 1304 aa15.12■□□□□ 0.01
VRK3-201ENST00000316763 MYO1CO00159 1063 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 EBAG9O00559 213 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PODXLO00592 558 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 EXTL3O43909 919 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 EDN1P05305 212 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms