RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 BTNL9Q6UXG8 535 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 PJA1Q8NG27 643 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 FAM149B1Q96BN6 582 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 REXO5Q96IC2 774 aaKnown RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 RHOBTB2Q9BYZ6 727 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 EBF3Q9H4W6 596 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 F6X3S4 739 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TNFAIP8O95379 198 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TFPTP0C1Z6 253 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 SMIM18P0DKX4 95 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 MYBP10242 640 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 KCNA6P17658 529 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 RAP1GDS1P52306 607 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 DLG4P78352 724 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 ARHGAP4P98171 946 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 PPP2R5CQ13362 524 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 C10orf62Q5T681 223 aaPredicted RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 ANO1Q5XXA6 986 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TMC3Q7Z5M5 1100 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 ADGRG6Q86SQ4 1221 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TRMT44Q8IYL2 757 aaKnown RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 HELQQ8TDG4 1101 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 HSPH1Q92598 858 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TAMM41Q96BW9 452 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 TRIM15Q9C019 465 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 SENP6Q9GZR1 1112 aaPredicted RBP9.8□□□□□ -0.84
BDNF-201ENST00000314915 USP40Q9NVE5 1235 aa9.8□□□□□ -0.84
BDNF-201ENST00000314915 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 PTPN9P43378 593 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 STT3AP46977 705 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 S100A12P80511 92 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SLX4IPQ5VYV7 408 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ZNF449Q6P9G9 518 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 PDSS2Q86YH6 399 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SHCBP1Q8NEM2 672 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 TCEANC2Q96MN5 208 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 LACRTQ9GZZ8 138 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 C15orf38-AP3S2A0A0A6YYH1 394 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CLRN2A0PK11 232 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 A8MX80 341 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ITM2AO43736 263 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SULT1C4O75897 302 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 IL10P22301 178 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CXCR2P25025 360 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 HADHAP40939 763 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 PTH1RQ03431 593 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 GFPT1Q06210 699 aaPredicted RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 MORC3Q14149 939 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 RNASEH2BQ5TBB1 312 aaKnown RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 NT5DC1Q5TFE4 455 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CDKAL1Q5VV42 579 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ELMSAN1Q6PJG2 1045 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ZNF704Q6ZNC4 412 aaPredicted RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 ARPINQ7Z6K5 226 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 METTL16Q86W50 562 aaKnown RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 DACT3Q96B18 629 aaPredicted RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 BTBD10Q9BSF8 475 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ARHGAP26Q9UNA1 814 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 POLHQ9Y253 713 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 TRAV6A0A075B6T7 132 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CASP5P51878 434 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 RAB3IL1Q8TBN0 382 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CKAP2Q8WWK9 683 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SLC7A3Q8WY07 619 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SERPINB12Q96P63 405 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 CLPBQ9H078 707 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 KLC2Q9H0B6 622 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SLC39A1Q9NY26 324 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 ASIC3Q9UHC3 531 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 SFMBT1Q9UHJ3 866 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 POU2F3Q9UKI9 436 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
BDNF-201ENST00000314915 CLIC4Q9Y696 253 aa9.79□□□□□ -0.84
BDNF-201ENST00000314915 TEX51A0A1B0GUA7 166 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 KRBA1A5PL33 1030 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 H3BUI4 141 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 CCRL2O00421 344 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
BDNF-201ENST00000314915 RAD51CO43502 376 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 EXOC3O60645 756 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 PPP6R2O75170 966 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 DDX58O95786 925 aaKnown RBP9.78□□□□□ -0.84
BDNF-201ENST00000314915 RARBP10826 455 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 GZMAP12544 262 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 CDC27P30260 824 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 ETV1P50549 477 aa9.78□□□□□ -0.84
BDNF-201ENST00000314915 SNX16P57768 344 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms