RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 MCUR1Q96AQ8 359 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CDCA5Q96FF9 252 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 TACO1Q9BSH4 297 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GTPBP10A4D1E9 387 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MAGEB2O15479 319 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CLTAP09496 248 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NLRP14Q86W24 1093 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 EFCAB13Q8IY85 973 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GPRC5DQ9NZD1 345 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 STAG3L1P0CL83 205 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 TMEM132DQ14C87 1099 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 ATP2A3Q93084 1043 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.361e-6■□□□□ 9.2
PRKDC-201ENST00000314191 SETD4Q9NVD3 440 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 PLIN4Q96Q06 1357 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MAP3K6O95382 1288 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 KRT7P08729 469 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CXCL8P10145 99 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 ITGA8P53708 1063 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 ROR1Q01973 937 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 KLRG1Q96E93 195 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 HNRNPH3P31942 346 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 TMEM161BQ8NDZ6 487 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MDM1Q8TC05 714 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CELF2O95319 508 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GJC2Q5T442 439 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 TBC1D1Q86TI0 1168 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 SCN4BQ8IWT1 228 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 ABCC6O95255 1503 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NFKBIEO00221 500 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NOL4O94818 638 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 RBP3P10745 1247 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MARSP56192 900 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 BMT2Q1RMZ1 405 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 AMPD2Q01433 879 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GCNT1Q02742 428 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GEN1Q17RS7 908 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CLEC16AQ2KHT3 1053 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MCOLN2Q8IZK6 566 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 SIK2Q9H0K1 926 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MROH8Q9H579 483 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 UBA1P22314 1058 aaKnown RBP6.53□□□□□ -1.36
PRKDC-201ENST00000314191 SMTNL2Q2TAL5 461 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ATP13A4Q4VNC1 1196 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 OR5B17Q8NGF7 314 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ACTRT1Q8TDG2 376 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF606Q8WXB4 792 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 HPDLQ96IR7 371 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF560Q96MR9 790 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 IRF6O14896 467 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CAV1Q03135 178 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ACOT1Q86TX2 421 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ABRAQ8N0Z2 381 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 C4orf33Q8N1A6 199 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CHMP6Q96FZ7 201 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 TNIP3Q96KP6 325 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 SSX2IPQ9Y2D8 614 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ANKRD26Q9UPS8 1709 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ADCY3O60266 1144 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 OAZ1P54368 228 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 RAPH1Q70E73 1250 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 MBOAT7Q96N66 472 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 WDR35Q9P2L0 1181 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF541Q9H0D2 1346 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ZC3H11AO75152 810 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRKDC-201ENST00000314191 MMP14P50281 582 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 NT5C1AQ9BXI3 368 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 AGTP01019 485 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 GJB1P08034 283 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 SLC12A2P55011 1212 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 P3H1Q32P28 736 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 TTYH3Q9C0H2 523 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CISHQ9NSE2 258 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 POLIQ9UNA4 740 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 HSD17B3P37058 310 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 TAP1Q03518 808 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 KRT35Q92764 455 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ADCYAP1R1P41586 468 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CAPSQ13938 189 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 EEF1DP3Q658K8 133 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 LENG9Q96B70 501 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 NCAPGQ9BPX3 1015 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 PYGMP11217 842 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 LRRC31Q6UY01 552 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 RIOX2Q8IUF8 465 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 NEU2Q9Y3R4 380 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CENPCQ03188 943 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CLEC4DQ8WXI8 215 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC97Q96F63 343 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-201ENST00000314191 CHST7Q9NS84 486 aa6.53□□□□□ -1.36
PRKDC-201ENST00000314191 G3BP2Q9UN86 482 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms