RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 KIAA1211LQ6NV74 962 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 POTEDQ86YR6 584 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 EIF2AK1Q9BQI3 630 aaKnown RBP13.01□□□□□ -0.33
SMIM4-201ENST00000307106 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
SMIM4-201ENST00000307106 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 GPRC5CQ9NQ84 441 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 AFF4Q9UHB7 1163 aaKnown RBP13.01□□□□□ -0.33
SMIM4-201ENST00000307106 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 NEUROG3Q9Y4Z2 214 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 TCHHQ07283 1943 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 LOC400499M0QZD8 3231 aa13.01□□□□□ -0.33
SMIM4-201ENST00000307106 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 DPYSL4O14531 572 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 HYAL3O43820 417 aaPredicted RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 LYPLA2O95372 231 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 LIG1P18858 919 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 TNK2Q07912 1038 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
SMIM4-201ENST00000307106 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 STXBP5Q5T5C0 1151 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 EEF1DP3Q658K8 133 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 TMEM209Q96SK2 561 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 PLXNB3Q9ULL4 1909 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
SMIM4-201ENST00000307106 LAMA5O15230 3695 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 PODXLO00592 558 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
SMIM4-201ENST00000307106 DCLK1O15075 740 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 DEXIO95424 95 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 EDN1P05305 212 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 CPB1P15086 417 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 RNF19BQ6ZMZ0 732 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 TMC8Q8IU68 726 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 DEFB124Q8NES8 71 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 HHIPQ96QV1 700 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 LRRC3Q9BY71 257 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 POLR3BQ9NW08 1133 aaPredicted RBP12.99□□□□□ -0.33
SMIM4-201ENST00000307106 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 MSRB2Q9Y3D2 182 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 NUB1Q9Y5A7 615 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 TSC2P49815 1807 aa12.99□□□□□ -0.33
SMIM4-201ENST00000307106 CACNA1EQ15878 2313 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 A0A087WWV3 80 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 ACKR2O00590 384 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 CDX4O14627 284 aaPredicted RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 UAP1L1Q3KQV9 507 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 SOWAHCQ53LP3 525 aaPredicted RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 TMEM196Q5HYL7 178 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 BPIFB1Q8TDL5 484 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 AIFM3Q96NN9 605 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 CCDC113Q9H0I3 377 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 OBP2AQ9NY56 170 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 SMG1Q96Q15 3661 aaKnown RBP12.98□□□□□ -0.33
SMIM4-201ENST00000307106 PTPRBP23467 1997 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
SMIM4-201ENST00000307106 GON4LQ3T8J9 2241 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 RNF40O75150 1001 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
SMIM4-201ENST00000307106 GBP1P32455 592 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 EPHB3P54753 998 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
SMIM4-201ENST00000307106 PLD1Q13393 1074 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 PTPAQ15257 358 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 GPR158Q5T848 1215 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
SMIM4-201ENST00000307106 MCPH1Q8NEM0 835 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 BSNDQ8WZ55 320 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 DDX12PQ92771 950 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 DNAJC25Q9H1X3 360 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms