RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GNGT1P63211 74 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 GPC5P78333 572 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TROAPQ12815 778 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 MORF4L2Q15014 288 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 IRAK1BP1Q5VVH5 260 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 SFR1Q86XK3 245 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ZSCAN9O15535 394 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ZRANB2O95218 330 aaKnown RBP eCLIP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 AARSP49588 968 aaKnown RBP eCLIP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 GEMIN4P57678 1058 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 DPYDQ12882 1025 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 NBPF12Q5TAG4 269 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ATP8B4Q8TF62 1192 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ZKSCAN4Q969J2 545 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ZBTB9Q96C00 473 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 MAN1C1Q9NR34 630 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 SNX5Q9Y5X3 404 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 STRCQ7RTU9 1775 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 A8MXQ7 604 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 VWA5AO00534 786 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC16A4O15374 487 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 MAN1A2O60476 641 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 CD58P19256 250 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 WDR48Q8TAF3 677 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 PYROXD1Q8WU10 500 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 PCIF1Q9H4Z3 704 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 EVA1BQ9NVM1 165 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 H3BRB1 525 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TMED2Q15363 201 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 AARS2Q5JTZ9 985 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 ING2Q9H160 280 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TUT1Q9H6E5 874 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 CNOT10Q9H9A5 744 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TMEM8AQ9HCN3 771 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 CASS4Q9NQ75 786 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 THG1LQ9NWX6 298 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 RRN3Q9NYV6 651 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 C6orf203Q9P0P8 240 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 GRIK1P39086 918 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 OCA2Q04671 838 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 GPIHBP1Q8IV16 184 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 RPRD1BQ9NQG5 326 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 XPNPEP3Q9NQH7 507 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 EXOC1LA0A1B0GW35 172 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 HARS2P49590 506 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 FSTL1Q12841 308 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 PIGHQ14442 188 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM110CQ1W6H9 321 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TCF7P36402 384 aaPredicted RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 RWDD2BP57060 319 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 EHHADHQ08426 723 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TMEM270Q6UE05 265 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 AKT1S1Q96B36 256 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 SYT17Q9BSW7 474 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 TRIM17Q9Y577 477 aa8.76□□□□□ -1.01
PCDHB1-201ENST00000306549 C5P01031 1676 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PIK3CDO00329 1044 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 RALBP11234 206 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 TAF6P49848 677 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SYTL3Q4VX76 610 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 HABP4Q5JVS0 413 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 EMILIN2Q9BXX0 1053 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 TRIM9Q9C026 710 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 WNT8AQ9H1J5 351 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 YY1AP1Q9H869 796 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 COL1A2P08123 1366 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 XYLBO75191 536 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 ASMTLO95671 621 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 THP07101 528 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC9A5Q14940 896 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 GOLGA8TH3BQL2 631 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 RHOBTB3O94955 611 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 CYP11B2P19099 503 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 ADORA2AP29274 412 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 OAS2P29728 719 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SF3A3Q12874 501 aaKnown RBP eCLIP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 NBPF20Q3BBV1 942 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 CYP4F22Q6NT55 531 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 WDR75Q8IWA0 830 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 BTN2A2Q8WVV5 523 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SKA1Q96BD8 255 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 FAF2Q96CS3 445 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 CATSPERBQ9H7T0 1116 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 UXTQ9UBK9 157 aaPredicted RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 GOLGA8IPA6NC78 632 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SMAPO00193 183 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PFDN1O60925 122 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT38O76015 456 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PRAMEP78395 509 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 RIC1Q4ADV7 1423 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 EFHC1Q5JVL4 640 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PKN3Q6P5Z2 889 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PLEKHM3Q6ZWE6 761 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 C4orf19Q8IY42 314 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms