RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 VCPIP1Q96JH7 1222 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 C20orf27Q9GZN8 174 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 SLC38A10Q9HBR0 1119 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 TBC1D22BQ9NU19 505 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 NMRK1Q9NWW6 199 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ZDHHC7Q9NXF8 308 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 BTBD7Q9P203 1132 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 DENND3A2RUS2 1198 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RASGRF2O14827 1237 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 AP1G1O43747 822 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 CALCAP01258 141 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 MYBL1P10243 752 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ITIH2P19823 946 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 GARTP22102 1010 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ICAM3P32942 547 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 CDH5P33151 784 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 GCLCP48506 637 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 RARRES1P49788 294 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ITGA8P53708 1063 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 PRKD1Q15139 912 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 PRR16Q569H4 304 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RBM26Q5T8P6 1007 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 MAEAQ7L5Y9 396 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 BANPQ8N9N5 519 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ARHGEF2Q92974 986 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 DYDC2Q96IM9 177 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ZNF778Q96MU6 729 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS50-202ENST00000305866 BHMT2Q9H2M3 363 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 COL20A1Q9P218 1284 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 GTF3C4Q9UKN8 822 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ASTN2O75129 1339 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 ADGRA2Q96PE1 1338 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 A0A1W2PPM1 405 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 SFI1A8K8P3 1242 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 PES1O00541 588 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 ZNF195O14628 629 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 WDR46O15213 610 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 RTN3O95197 1032 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 ATP2A2P16615 1042 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 DSG3P32926 999 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RPA3P35244 121 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 GPC5P78333 572 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 OGDHQ02218 1023 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 CENPCQ03188 943 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 DENND2CQ68D51 928 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ZNF746Q6NUN9 644 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 RINLQ6ZS11 566 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ADAT2Q7Z6V5 191 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 VPS36Q86VN1 386 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 CCDC24Q8N4L8 307 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 TEX9Q8N6V9 391 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RFWD2Q8NHY2 731 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ATG4AQ8WYN0 398 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 PCMTD1Q96MG8 357 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 RUFY1Q96T51 708 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ZNF341Q9BYN7 854 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 KLHL14Q9P2G3 628 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 PARP2Q9UGN5 583 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 TBX10O75333 385 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 VNN1O95497 513 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SMIM18P0DKX4 95 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 CYP11B1P15538 503 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SLCO1A2P46721 670 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 JAK3P52333 1124 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 MRPS9P82933 396 aaKnown RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 KRT17Q04695 432 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SLC18A2Q05940 514 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 TBL3Q12788 808 aaKnown RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 HLTFQ14527 1009 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS50-202ENST00000305866 MYLK4Q86YV6 388 aaPredicted RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 GBP7Q8N8V2 638 aaPredicted RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 TMEM161BQ8NDZ6 487 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ZNF398Q8TD17 642 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 PIGOQ8TEQ8 1089 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SCLT1Q96NL6 688 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ACCSQ96QU6 501 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SLX1AQ9BQ83 275 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 CBWD1Q9BRT8 395 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 TEKT3Q9BXF9 490 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 FHDC1Q9C0D6 1143 aaPredicted RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 SLC24A3Q9HC58 644 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 VAT1LQ9HCJ6 419 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ZNF70Q9UC06 446 aaPredicted RBP5.78□□□□□ -1.48
VPS50-202ENST00000305866 POLIQ9UNA4 740 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 GOLGA6L7A0A1B0GV03 622 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ALOX15BO15296 676 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 CLDN3O15551 220 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ENTPD5O75356 428 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 EPHB2P29323 1055 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ARRB2P32121 409 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 NF2P35240 595 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 SLC1A1P43005 524 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 ARSEP51690 589 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 CDR2Q01850 454 aa5.78□□□□□ -1.48
VPS50-202ENST00000305866 KYNUQ16719 465 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms