RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 GOLPH3Q9H4A6 298 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 ZNF446Q9NWS9 450 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CNOT8Q9UFF9 292 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CCDC188H7C350 402 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 TREHO43280 583 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 THAP12O43422 761 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CLSTN1O94985 981 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 PAEPP09466 180 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 FLT3LGP49771 235 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 TNNC1P63316 161 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 RBP5P82980 135 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 HIC1Q14526 733 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 SNX17Q15036 470 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 MAP9Q49MG5 647 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 UBL4BQ8N7F7 174 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CYFIP2Q96F07 1278 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 MS4A14Q96JA4 679 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 OSMRQ99650 979 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 MRPL47Q9HD33 250 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 RBM12Q9NTZ6 932 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 LCMT1Q9UIC8 334 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 RALGAPA2Q2PPJ7 1873 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 CEP104O60308 925 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 TOMM70O94826 608 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 ITGB3P05106 788 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 KRT19P08727 400 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 C6orf222P0C671 652 aaPredicted RBP11.3□□□□□ -0.6
CLP1-201ENST00000302731 RARBP10826 455 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 CTNNA2P26232 953 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 SLC1A1P43005 524 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 DNA2P51530 1060 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
CLP1-201ENST00000302731 VSNL1P62760 191 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
CLP1-201ENST00000302731 PPP2R5EQ16537 467 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 BEND6Q5SZJ8 279 aaPredicted RBP11.3□□□□□ -0.6
CLP1-201ENST00000302731 NAA35Q5VZE5 725 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 CD101Q93033 1021 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 SNX27Q96L92 541 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 FAM53CQ9NYF3 392 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 GABRQQ9UN88 632 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 SCINQ9Y6U3 715 aa11.3□□□□□ -0.6
CLP1-201ENST00000302731 MED7O43513 233 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 NPTXRO95502 500 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 CALB1P05937 261 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 MMP8P22894 467 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 TNFRSF8P28908 595 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 PTP4A2Q12974 167 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 MESDQ14696 234 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ZBTB6Q15916 424 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 LONRF2Q1L5Z9 754 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 GNASQ5JWF2 1037 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 PLEKHA7Q6IQ23 1121 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 TMEM35BQ8NCS4 154 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 CPA5Q8WXQ8 436 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 HPDLQ96IR7 371 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 DPP3Q9NY33 737 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 OGFRQ9NZT2 677 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 GTF2IRD1Q9UHL9 959 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 NOC2LQ9Y3T9 749 aaKnown RBP11.29□□□□□ -0.6
CLP1-201ENST00000302731 CEP83Q9Y592 693 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 SCN10AQ9Y5Y9 1956 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 CITO14578 2027 aa11.29□□□□□ -0.6
CLP1-201ENST00000302731 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 CILPO75339 1184 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 WEE2P0C1S8 567 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 HSPA6P17066 643 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 CD58P19256 250 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 COMTP21964 271 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 FGFR4P22455 802 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 RRM1P23921 792 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 CST5P28325 142 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms