RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 GPC3P51654 580 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 CDH8P55286 799 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 DYNLT1P63172 113 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 TRPC3Q13507 836 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 KCTD2Q14681 263 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 PREPLQ4J6C6 727 aaPredicted RBP10.74□□□□□ -0.69
FOXN4-201ENST00000299162 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 TMEM192Q8IY95 271 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 FUKQ8N0W3 1084 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 SAMD3Q8N6K7 520 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 RBBP8NLQ8NC74 664 aaPredicted RBP10.74□□□□□ -0.69
FOXN4-201ENST00000299162 LRRC45Q96CN5 670 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 ATP6V1G3Q96LB4 118 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 MFSD14AQ96MC6 490 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 PORCNQ9H237 461 aa10.74□□□□□ -0.69
FOXN4-201ENST00000299162 TCF4P15884 667 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 RWDD2BP57060 319 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 RPL7AP62424 266 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 USP4Q13107 963 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 MYBPC2Q14324 1141 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 CRYMQ14894 314 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 ACAD10Q6JQN1 1059 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 CRELD2Q6UXH1 353 aaPredicted RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 GSTA5Q7RTV2 222 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 GPC2Q8N158 579 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 NSMCE1Q8WV22 266 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 HVCN1Q96D96 273 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 HERPUD2Q9BSE4 406 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 C10orf88Q9H8K7 445 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 P4HA2O15460 535 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 VIMP08670 466 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 FDX1P10109 184 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 TXNP10599 105 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 GTF2H1P32780 548 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 ZNF844Q08AG5 666 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 CUL1Q13616 776 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 SYCP2LQ5T4T6 812 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 C12orf56Q8IXR9 622 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 C3orf20Q8ND61 904 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 OSBPL7Q9BZF2 842 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 RAB17Q9H0T7 212 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 MTUS1Q9ULD2 1270 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 MYH9P35579 1960 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 ZBTB48P10074 688 aaPredicted RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 RFX1P22670 979 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 PTENP60484 403 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 CUL2Q13617 745 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 CLEC16AQ2KHT3 1053 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 SMTNL2Q2TAL5 461 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 DCUN1D2Q6PH85 259 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 TMC3Q7Z5M5 1100 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 RASGEF1CQ8N431 466 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 C1orf131Q8NDD1 294 aaKnown RBP10.73□□□□□ -0.69
FOXN4-201ENST00000299162 SEPT1Q8WYJ6 367 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
FOXN4-201ENST00000299162 GMNCA6NCL1 334 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 SNUPNO95149 360 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 FAM107AO95990 144 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TMEM191BP0C7N4 346 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ZNF286BP0CG31 522 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 RALAP11233 206 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ANXA13P27216 316 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 SLC29A2Q14542 456 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ZNF568Q3ZCX4 644 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ZACNQ401N2 412 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 SLC13A5Q86YT5 568 aaPredicted RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 DDX1Q92499 740 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 OPTNQ96CV9 577 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 CPB2Q96IY4 423 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 SEC16BQ96JE7 1060 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 NTPCRQ9BSD7 190 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 SLITRK6Q9H5Y7 841 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TBK1Q9UHD2 729 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 POLIQ9UNA4 740 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TLR3O15455 904 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 IFNB1P01574 187 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 VTNP04004 478 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 PRKCBP05771 671 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 GARTP22102 1010 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 IREB2P48200 963 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 EEF1DP3Q658K8 133 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 MCOLN2Q8IZK6 566 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 KIF2BQ8N4N8 673 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
FOXN4-201ENST00000299162 LMCD1Q9NZU5 365 aa10.72□□□□□ -0.69
FOXN4-201ENST00000299162 TJP2Q9UDY2 1190 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms