RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 RGS20O76081 388 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PSMC5P62195 406 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 EIF2B5Q13144 721 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 HDDC2Q7Z4H3 204 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 BHMTQ93088 406 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FAM167AQ96KS9 214 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 OSBPL3Q9H4L5 887 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 POLD4Q9HCU8 107 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 GJB4Q9NTQ9 266 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RALBP11234 206 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NNMTP40261 264 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CACNB2Q08289 660 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MKRN4PQ13434 485 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PADI6Q6TGC4 694 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 REM2Q8IYK8 340 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DGCR14Q96DF8 476 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DCUN1D1Q96GG9 259 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 OSBPL10Q9BXB5 764 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RAVER2Q9HCJ3 691 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DYRK4Q9NR20 520 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 EMC3Q9P0I2 261 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 USP15Q9Y4E8 981 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RNF17Q9BXT8 1623 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SUPT3HB4E1H0 165 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CYP2D6P10635 497 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NCALDP61601 193 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ZNF200P98182 395 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DCTN2Q13561 401 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CUL4AQ13619 759 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RC3H1Q5TC82 1133 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SETD3Q86TU7 594 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 C4orf33Q8N1A6 199 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CALML6Q8TD86 181 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 INPP5DQ92835 1189 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PLEKHA8Q96JA3 519 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TASP1Q9H6P5 420 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ZCCHC17Q9NP64 241 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FAM217BQ9NTX9 383 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NSMCE4AQ9NXX6 385 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 GABBR1Q9UBS5 961 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 EVPLLA8MZ36 301 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SASH1O94885 1247 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PPP1R18Q6NYC8 613 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ZNF579Q8NAF0 562 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ARHGEF26Q96DR7 871 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 AGPAT1Q99943 283 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RANBP17Q9H2T7 1088 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RBAKQ9NYW8 714 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 H2AFY2Q9P0M6 372 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ZC3H4Q9UPT8 1303 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NCAPD2Q15021 1401 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PP2D1A8MPX8 630 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 GRIK1P39086 918 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TP53BP2Q13625 1128 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TXNRD1Q16881 649 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 OXER1Q8TDS5 423 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MCEEQ96PE7 176 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 BBS2Q9BXC9 721 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 BFARQ9NZS9 450 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FAM32AQ9Y421 112 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MBD5Q9P267 1494 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DPYSL4O14531 572 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FCER1AP12319 257 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NFX1Q12986 1120 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PFKFB3Q16875 520 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TUBA3EQ6PEY2 450 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CCDC81Q6ZN84 652 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SYDE1Q6ZW31 735 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RASSF5Q8WWW0 418 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CEP95Q96GE4 821 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MLPHQ9BV36 600 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 UBE2OQ9C0C9 1292 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ASAP1Q9ULH1 1129 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SPATA31A3Q5VYP0 1347 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 UNC13BO14795 1591 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TSC22D2O75157 780 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CPB1P15086 417 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CLK1P49759 484 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 WASHC5Q12768 1159 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RNASE11Q8TAA1 199 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ZNF668Q96K58 619 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ABT1Q9ULW3 272 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ADGRG1Q9Y653 693 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FAM47DPA6NHR8 397 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 NMT2O60551 498 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 GUCY1B2O75343 617 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 SOX6P35712 828 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 TPI1P60174 286 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 NLRP10Q86W26 655 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 ASAP3Q8TDY4 903 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 SEC16BQ96JE7 1060 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 TTC26A0AVF1 554 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 FAM187AA6NFU0 413 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 M0R3G1 203 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 KPNA4O00629 521 aaPredicted RBP5.81□□□□□ -1.48
CPSF2-201ENST00000298875 PHF2O75151 1096 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 ATPAF2Q8N5M1 289 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 RFFLQ8WZ73 363 aa5.81□□□□□ -1.48
CPSF2-201ENST00000298875 LRRC39Q96DD0 335 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms