RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 HADHBP55084 474 aaKnown RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 HTRA3P83110 453 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 MEI1Q5TIA1 1274 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ALKAL1Q6UXT8 129 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 SLFN11Q7Z7L1 901 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ZNF296Q8WUU4 475 aaPredicted RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 BCO2Q9BYV7 579 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 TFRCP02786 760 aaKnown RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 GNA15P30679 374 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 YWHAEP62258 255 aaKnown RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 MGAT3Q09327 533 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 ZBTB6Q15916 424 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 ACAD10Q6JQN1 1059 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 RHOT2Q8IXI1 618 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 KIF12Q96FN5 646 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 CALR3Q96L12 384 aaKnown RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 SENP6Q9GZR1 1112 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 DPP3Q9NY33 737 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 CNTN3Q9P232 1028 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 HYOU1Q9Y4L1 999 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 NCK2O43639 380 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 CYP1A1P04798 512 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 INHAP05111 366 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 TCP1P17987 556 aaKnown RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 GPC5P78333 572 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 RBP5P82980 135 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 TRIM72Q6ZMU5 477 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 TMEM130Q8N3G9 435 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
LSM6-201ENST00000296581 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 HES2Q9Y543 173 aa16.61■□□□□ 0.25
LSM6-201ENST00000296581 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
LSM6-201ENST00000296581 RECQL4O94761 1208 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 FTCDO95954 541 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 CHRNA1P02708 482 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 POLR2BP30876 1174 aaKnown RBP16.6■□□□□ 0.25
LSM6-201ENST00000296581 ACLYP53396 1101 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
LSM6-201ENST00000296581 XKR4Q5GH76 650 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 ZMAT2Q96NC0 199 aaKnown RBP16.6■□□□□ 0.25
LSM6-201ENST00000296581 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 OSBPL9Q96SU4 736 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 CXCL16Q9H2A7 254 aa16.6■□□□□ 0.25
LSM6-201ENST00000296581 MTA2O94776 668 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 WEE2P0C1S8 567 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 GUCY2FP51841 1108 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 ITGA7Q13683 1181 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 PTGISQ16647 500 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 NXF1Q9UBU9 619 aaKnown RBP16.59■□□□□ 0.25
LSM6-201ENST00000296581 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
LSM6-201ENST00000296581 GTF3C4Q9UKN8 822 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 MOXD2PA6NHM9 499 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 CD58P19256 250 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 CENPCQ03188 943 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 ICE2Q659A1 982 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 LHX8Q68G74 356 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 MYCBPQ99417 103 aaPredicted RBP16.59■□□□□ 0.25
LSM6-201ENST00000296581 TSEN34Q9BSV6 310 aaKnown RBP16.59■□□□□ 0.25
LSM6-201ENST00000296581 CYP3A43Q9HB55 503 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 COG5Q9UP83 839 aa16.59■□□□□ 0.25
LSM6-201ENST00000296581 CYP1A2P05177 515 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 CKAP4Q07065 602 aaKnown RBP16.58■□□□□ 0.25
LSM6-201ENST00000296581 CREG2Q8IUH2 290 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 SMG8Q8ND04 991 aaKnown RBP16.58■□□□□ 0.25
LSM6-201ENST00000296581 ZNF606Q8WXB4 792 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 UBXN4Q92575 508 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 GOLGA1Q92805 767 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 SDCBP2Q9H190 292 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 FAM124BQ9H5Z6 455 aaPredicted RBP16.58■□□□□ 0.25
LSM6-201ENST00000296581 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.25
LSM6-201ENST00000296581 ABCB6Q9NP58 842 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 STXBP5LQ9Y2K9 1186 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 IPPQ9Y573 584 aa16.58■□□□□ 0.25
LSM6-201ENST00000296581 CTAGE15A4D2H0 777 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 ZNF185O15231 689 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 THAP12O43422 761 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
LSM6-201ENST00000296581 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 CTAGE8P0CG41 777 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 P4HA1P13674 534 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms