RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 APPL2Q8NEU8 664 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SUSD3Q96L08 255 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 CLSTN3Q9BQT9 956 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 DZANK1Q9NVP4 752 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 H7C4K7 107 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 PDXKO00764 312 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 PPEF2O14830 753 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 OR1D2P34982 312 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 WNT7BP56706 349 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SNRNP35Q16560 246 aaKnown RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 NECAB3Q96P71 396 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 S1PR5Q9H228 398 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 A0A0C4DFX4 3053 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 PIRO00625 290 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 TGM5O43548 720 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 CALUO43852 315 aaPredicted RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 ARPP19P56211 112 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 LILRA4P59901 499 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 UBE2HP62256 183 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 SYCP1Q15431 976 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 SMAD2Q15796 467 aaKnown RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 LMBRD2Q68DH5 695 aaPredicted RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 USP37Q86T82 979 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 CSGALNACT2Q8N6G5 542 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 ANKRD36BP1Q96IX9 119 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 GSDMAQ96QA5 445 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 MAN1C1Q9NR34 630 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 PCDHA5Q9Y5H7 936 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 TIMM13Q9Y5L4 95 aaPredicted RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
HMGB2-201ENST00000296503 SPTBN5Q9NRC6 3674 aaKnown RBP13.05□□□□□ -0.32
HMGB2-201ENST00000296503 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 SYCE3A1L190 88 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ADAM12O43184 909 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 KRT19P08727 400 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 TNNI1P19237 187 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 PAX3P23760 479 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 TAF6P49848 677 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ITIH3Q06033 890 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 CTXN3Q4LDR2 81 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 TMC5Q6UXY8 1006 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 SENP8Q96LD8 212 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ADAM7Q9H2U9 754 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 KCTD10Q9H3F6 313 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 AGAP1Q9UPQ3 857 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.325e-9■■□□□ 12.6
HMGB2-201ENST00000296503 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ANK1P16157 1881 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 M0QZQ0 153 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 TNNC2P02585 160 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ITGB3P05106 788 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
HMGB2-201ENST00000296503 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 RSPO2Q6UXX9 243 aaPredicted RBP13.04□□□□□ -0.32
HMGB2-201ENST00000296503 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
HMGB2-201ENST00000296503 GUF1Q8N442 669 aaKnown RBP13.04□□□□□ -0.32
HMGB2-201ENST00000296503 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
HMGB2-201ENST00000296503 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 CCDC195A0A1B0GUA6 201 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 SPTLC1O15269 473 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 C1RP00736 705 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 NR3C1P04150 777 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 POLR2BP30876 1174 aaKnown RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 RBP5P82980 135 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 RAB33AQ14088 237 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 MRPL58Q14197 206 aaKnown RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 RIPOR3Q96MK2 946 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
HMGB2-201ENST00000296503 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms