RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NAB2Q15742 525 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 CRLF3Q8IUI8 442 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZFPM1Q8IX07 1006 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 EGFL8Q99944 293 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 SLC13A4Q9UKG4 626 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 PCDHB12Q9Y5F1 795 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 PQBP1O60828 265 aaKnown RBP18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 GUCY2CP25092 1073 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 SPARCL1Q14515 664 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 P3H1Q32P28 736 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 KLHDC7AQ5VTJ3 777 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 WDR75Q8IWA0 830 aaKnown RBP18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 CNPY4Q8N129 248 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 PBXIP1Q96AQ6 731 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 PACSIN2Q9UNF0 486 aaPredicted RBP18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 RSPH10B2B2RC85 870 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 DNAJC6O75061 913 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 GRAP2O75791 330 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 RSPH10BP0C881 870 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 ARSEP51690 589 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 COPS2P61201 443 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 IZUMO3Q5VZ72 239 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 PI4K2BG5E9Z4 385 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 KCNN4O15554 427 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 ASMTLO95671 621 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 GTF2H3Q13889 308 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 CCDC144BQ3MJ40 725 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 TUBB6Q9BUF5 446 aa18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMPRSS15P98073 1019 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 LAMTOR4Q0VGL1 99 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 GIT2Q14161 759 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 MFSD10Q14728 455 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 PTPAQ15257 358 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZSCAN26Q16670 478 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 DEFB128Q7Z7B8 93 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 RIOX2Q8IUF8 465 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CAMTA1Q9Y6Y1 1673 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 RASA4BC9J798 803 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CYB561D2O14569 222 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 RASA4O43374 803 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ATP9BO43861 1147 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 BAG2O95816 211 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 MRPS25P82663 173 aaKnown RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CASP8Q14790 479 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 SEZ6Q53EL9 994 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ATP6V0D2Q8N8Y2 350 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 PPHLN1Q8NEY8 458 aaKnown RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 A1CFQ9NQ94 594 aaKnown RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMEM247A6NEH6 219 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 AP1G2O75843 785 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMCC1O94876 653 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ESRRBO95718 433 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ALDH2P05091 517 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CATSPERGQ6ZRH7 1159 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 TTC17Q96AE7 1141 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMEM117Q9H0C3 514 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 SUDS3Q9H7L9 328 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ABCB6Q9NP58 842 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 GSTA4O15217 222 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 POU5F1BQ06416 359 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 NR1I3Q14994 352 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CTXN3Q4LDR2 81 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZNF280DQ6N043 979 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CBWD2Q8IUF1 395 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZNF197O14709 1029 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 CABYRO75952 493 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 NR1D1P20393 614 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 SLC11A2P49281 568 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 PDK1Q15118 436 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZBED8Q8IZ13 594 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 KRT35Q92764 455 aa18.61■□□□□ 0.57
CDC42EP3-201ENST00000295324 A0A1W2PQJ5 194 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 IRF6O14896 467 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 FOXP2O15409 715 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 SYDE1Q6ZW31 735 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 CGRRF1Q99675 332 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 RSAD1Q9HA92 442 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 TBC1D12O60347 775 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 BRD2P25440 801 aaKnown RBP18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 ARHGEF7Q14155 803 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 NTRK3Q16288 839 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 NFE2Q16621 373 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 MKL1Q969V6 931 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 MTMR12Q9C0I1 747 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 FAM96AQ9H5X1 160 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 PLAAQ9Y263 795 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 RHBDL3P58872 404 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMC2Q8TDI7 906 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 SNX19Q92543 992 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 VDRP11473 427 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 ACO1P21399 889 aaKnown RBP18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 PDE1CQ14123 709 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
CDC42EP3-201ENST00000295324 MTSS1O43312 755 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms