RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 ZBTB21Q9ULJ3 1066 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 MAGEB2O15479 319 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 KRT10P13645 584 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 AMPD1P23109 780 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 OCRLQ01968 901 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 AP3B2Q13367 1082 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 KBTBD2Q8IY47 623 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 VAV3Q9UKW4 847 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLC26A4O43511 780 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 CREB3O43889 395 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 GAS7O60861 476 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLITRK3O94933 977 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 CFBP00751 764 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 ARSEP51690 589 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 GTF2IP78347 998 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 MCL1Q07820 350 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLC10A5Q5PT55 438 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLCO2A1Q92959 643 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 POLR3CQ9BUI4 534 aaPredicted RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 AMNQ9BXJ7 453 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 TMEM120AQ9BXJ8 343 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 OSBPL8Q9BZF1 889 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 DMAC2Q9NW81 257 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 PDP2Q9P2J9 529 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 TBX3O15119 743 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 PRPF4O43172 522 aaKnown RBP eCLIP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 ENO1P06733 434 aaKnown RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 GCAP28676 217 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SCNN1DP51172 638 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 AP1B1Q10567 949 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 TBC1D25Q3MII6 688 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLC25A41Q8N5S1 370 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 LINC00116Q8NCU8 138 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 FAM81AQ8TBF8 368 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 TCP10LQ8TDR4 215 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 NDNQ99608 321 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 VCX3BQ9H321 246 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 VCX3AQ9NNX9 186 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 DDX4Q9NQI0 724 aaKnown RBP10.85□□□□□ -0.67
LMX1A-201ENST00000294816 SLC17A7Q9P2U7 560 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 DAGLAQ9Y4D2 1042 aa10.85□□□□□ -0.67
LMX1A-201ENST00000294816 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 SIGLEC16A6NMB1 481 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 B2RBV5 119 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 H3BRJ5 948 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ATP2A1O14983 1001 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ECE2O60344 883 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 CIB2O75838 187 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 MTA2O94776 668 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 USP1O94782 785 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 LYNP07948 512 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 MUTP22033 750 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 Q4G0T1 1027 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 C6orf163Q5TEZ5 329 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ZCCHC9Q8N567 271 aaKnown RBP10.84□□□□□ -0.67
LMX1A-201ENST00000294816 SH3TC2Q8TF17 1288 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 PSMC3IPQ9P2W1 217 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ANGPTL2Q9UKU9 493 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 TRAFD1O14545 582 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-201ENST00000294816 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 YY1P25490 414 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 KDSRQ06136 332 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 TCP10Q12799 353 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 CNPY1Q3B7I2 92 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 BICD1Q96G01 975 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 CLPTM1LQ96KA5 538 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 TUBGCP5Q96RT8 1024 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 PI4K2AQ9BTU6 479 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 MANSC1Q9H8J5 431 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 TOPORSQ9NS56 1045 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-201ENST00000294816 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 LNPEPQ9UIQ6 1025 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 ROBO1Q9Y6N7 1651 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
LMX1A-201ENST00000294816 HNRNPCL1O60812 293 aaKnown RBP10.83□□□□□ -0.67
LMX1A-201ENST00000294816 SSTR1P30872 391 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 GPSM2P81274 684 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 ARHGAP24Q8N264 748 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 XXYLT1Q8NBI6 393 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 SEMA4DQ92854 862 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 MBOAT7Q96N66 472 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 TIPINQ9BVW5 301 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 OCEL1Q9H607 264 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms