RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TRIP11Q15643 1979 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 C17orf102A2RUQ5 167 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 KRIT1O00522 736 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 STAU1O95793 577 aaKnown RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 CYP1A2P05177 515 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 TNFRSF8P28908 595 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 APLP1P51693 650 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 GABPB1Q06547 395 aaPredicted RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 SGSM1Q2NKQ1 1148 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 SLC10A6Q3KNW5 377 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 CD302Q8IX05 232 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 CEP120Q8N960 986 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 ZNF564Q8TBZ8 553 aaPredicted RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 TRIM11Q96F44 468 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 CPB2Q96IY4 423 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 RPS6KC1Q96S38 1066 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 RPF1Q9H9Y2 349 aaKnown RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 TTC7AQ9ULT0 858 aaPredicted RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 DERAQ9Y315 318 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 LACTBL1A8MY62 500 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 TREHO43280 583 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 HEXIM1O94992 359 aaKnown RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 GNAT1P11488 350 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 EPHB4P54760 987 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 MRPS25P82663 173 aaKnown RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 TRPC3Q13507 836 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 MESDQ14696 234 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 HSP90B2PQ58FF3 399 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 KLHL7Q8IXQ5 586 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 NUP85Q9BW27 656 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 UBXN6Q9BZV1 441 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 MTMR12Q9C0I1 747 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 FAM124BQ9H5Z6 455 aaPredicted RBP9.77□□□□□ -0.85
PDPN-201ENST00000294489 PLEKHA5Q9HAU0 1116 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 RNF186Q9NXI6 227 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 SIX4Q9UIU6 781 aa9.77□□□□□ -0.85
PDPN-201ENST00000294489 DDX3YO15523 660 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GNRH1P01148 92 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TMEM191BP0C7N4 346 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 CXCL8P10145 99 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 MYBL1P10243 752 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 MYBL2P10244 700 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 MAP2K2P36507 400 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 NSFP46459 744 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 CRYBB1P53674 252 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 TMEM270Q6UE05 265 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TRIM72Q6ZMU5 477 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 THNSL1Q8IYQ7 743 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TSPAN18Q96SJ8 248 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 HINFPQ9BQA5 517 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 BCO2Q9BYV7 579 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 CNOT8Q9UFF9 292 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GTF2IRD1Q9UHL9 959 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 C2CD2Q9Y426 696 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 UMODL1Q5DID0 1318 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 MROH7Q68CQ1 1323 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TMEM110-MUSTN1A8MSY1 372 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 CSDE1O75534 798 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 TNNC2P02585 160 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 UNGP13051 313 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 OAS2P29728 719 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GUCY2DQ02846 1103 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TRIM32Q13049 653 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 XKR4Q5GH76 650 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 PPP1R2P3Q6NXS1 205 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TAF2Q6P1X5 1199 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 EMBQ6PCB8 327 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 GSPT2Q8IYD1 628 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 AENQ8WTP8 325 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 ANKRD36BP1Q96IX9 119 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 AP1M1Q9BXS5 423 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 WNT8AQ9H1J5 351 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 EPB41L5Q9HCM4 733 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 SRRDQ9UH36 339 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 GOLGA6L10A0A0M3HER8 536 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 SPOPO43791 374 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 ERLIN2O94905 339 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 FGGP02679 453 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 CYP1A1P04798 512 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GLI1P08151 1106 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 EIF4BP23588 611 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GNA15P30679 374 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 ATICP31939 592 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 ASPAP45381 313 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 MYL6P60660 151 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 TFAMQ00059 246 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 SNX17Q15036 470 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 PPP2R5EQ16537 467 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 JADE1Q6IE81 842 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 SLC27A1Q6PCB7 646 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 RBBP8NLQ8NC74 664 aaPredicted RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 CCDC26Q8TAB7 109 aa9.76□□□□□ -0.85
PDPN-201ENST00000294489 RNPC3Q96LT9 517 aaKnown RBP9.76□□□□□ -0.85
PDPN-201ENST00000294489 GDF3Q9NR23 364 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms