RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CDC42EP4Q9H3Q1 356 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 LRRC19Q9H756 370 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 STYXL1Q9Y6J8 313 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 MCM3APO60318 1980 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 KRT19P08727 400 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 CHN1P15882 459 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 CYP4A22Q5TCH4 519 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ZNF606Q8WXB4 792 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 SEPT1Q8WYJ6 367 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ART4Q93070 314 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 AVENQ9NQS1 362 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ITGA8P53708 1063 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 ADCY1Q08828 1119 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 CPLX4Q7Z7G2 160 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 EFCAB13Q8IY85 973 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 TRIM11Q96F44 468 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 SCLT1Q96NL6 688 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 MCEEQ96PE7 176 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 NIFKQ9BYG3 293 aaKnown RBP16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 CENPFP49454 3210 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 RASGRF2O14827 1237 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 B4GALT5O43286 388 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 NUDT17P0C025 328 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 MYBL1P10243 752 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 TRPC3Q13507 836 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 NEDD9Q14511 834 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 EMC10Q5UCC4 262 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 DCLK3Q9C098 648 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 MLXIPLQ9NP71 852 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 CTNNAL1Q9UBT7 734 aa16.79■□□□□ 0.28
NCKIPSD-201ENST00000294129 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 PRKCBP05771 671 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 ATF2P15336 505 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 PSMC4P43686 418 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 ADCY2Q08462 1091 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 HP1BP3Q5SSJ5 553 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 TAX1BP1Q86VP1 789 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 OSBPL8Q9BZF1 889 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 KCNG1Q9UIX4 513 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 ADGRA2Q96PE1 1338 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 EVPLQ92817 2033 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 GAS8O95995 478 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 CD19P15391 556 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 RFC5P40937 340 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 SLMAPQ14BN4 828 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 KYNUQ16719 465 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 DPH6Q7L8W6 267 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 RIOX2Q8IUF8 465 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 RHOT1Q8IXI2 618 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 TLCD1Q96CP7 247 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 FAM81BQ96LP2 452 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 TXNRD2Q9NNW7 524 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 TBK1Q9UHD2 729 aa16.78■□□□□ 0.28
NCKIPSD-201ENST00000294129 GOLGA8SH3BPF8 625 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 RARGP13631 454 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 SLC1A1P43005 524 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 CLCN3P51790 818 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 LRRC14Q15048 493 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 MAPK6Q16659 721 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 GJC2Q5T442 439 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 METTL7BQ6UX53 244 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 A0A087WUV0 522 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 IGKV6D-21A0A0A0MT36 114 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 H0YHG0 523 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 MSCO60682 206 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 TMEM191BP0C7N4 346 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 CDR1P51861 262 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 BYSLQ13895 437 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 NOL9Q5SY16 702 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 ICE2Q659A1 982 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 SNF8Q96H20 258 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 DDX20Q9UHI6 824 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 ANAPC5Q9UJX4 755 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 CAPN7Q9Y6W3 813 aa16.77■□□□□ 0.28
NCKIPSD-201ENST00000294129 LTBP3Q9NS15 1303 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 F8VP50 259 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 TP73O15350 636 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 MAFO75444 373 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms