RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RNF225M0QZC1 329 aaPredicted RBP19.1■□□□□ 0.65
CCDC78-201ENST00000293889 ATICP31939 592 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 CLCNKBP51801 687 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 POLR2FP61218 127 aaKnown RBP19.1■□□□□ 0.65
CCDC78-201ENST00000293889 NOP14P78316 857 aaKnown RBP19.1■□□□□ 0.65
CCDC78-201ENST00000293889 DSC1Q08554 894 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 ZNF699Q32M78 642 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 LRIT3Q3SXY7 679 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 FIGNQ5HY92 759 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 IQCEQ6IPM2 695 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 PPFIBP1Q86W92 1011 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 LRRC52Q8N7C0 313 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 CPLX3Q8WVH0 158 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 RSPH1Q8WYR4 309 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 TAF4BQ92750 862 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 PAAF1Q9BRP4 392 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 IMPG2Q9BZV3 1241 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 FHOD1Q9Y613 1164 aa19.1■□□□□ 0.65
CCDC78-201ENST00000293889 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 CLSTN1O94985 981 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 IGFBP6P24592 240 aaPredicted RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 RPL9P32969 192 aaKnown RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 RABGGTBP53611 331 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 UPP1Q16831 310 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 PAN2Q504Q3 1202 aaKnown RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 RRAGAQ7L523 313 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 COLGALT2Q8IYK4 626 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 RABGGTAQ92696 567 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 ZNF689Q96CS4 500 aaPredicted RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 NAA15Q9BXJ9 866 aaKnown RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 VRTNQ9H8Y1 702 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 UBE2TQ9NPD8 197 aaPredicted RBP19.09■□□□□ 0.65
CCDC78-201ENST00000293889 CEP72Q9P209 647 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 HCSTQ9UBK5 93 aa19.09■□□□□ 0.65
CCDC78-201ENST00000293889 SCN1AP35498 2009 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 SOX1O00570 391 aaPredicted RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 PODXLO00592 558 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 GJB5O95377 273 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 STAU1O95793 577 aaKnown RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 CASP14P31944 242 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 PBX2P40425 430 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 FXR1P51114 621 aaKnown RBP eCLIP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 MYO1EQ12965 1108 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 TRIM14Q14142 442 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 HABP4Q5JVS0 413 aaKnown RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 PPM1KQ8N3J5 372 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 ANKRD7Q92527 254 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 KAT5Q92993 513 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 IQCDQ96DY2 449 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 DDX27Q96GQ7 796 aaKnown RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 UROC1Q96N76 676 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 FAM193BQ96PV7 902 aaPredicted RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 NRDE2Q9H7Z3 1164 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 RC3H2Q9HBD1 1191 aaKnown RBP19.08■□□□□ 0.65
CCDC78-201ENST00000293889 NLRC4Q9NPP4 1024 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 DNAJB4Q9UDY4 337 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 FBXL5Q9UKA1 691 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 DNAJC12Q9UKB3 198 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 CAPN11Q9UMQ6 739 aa19.08■□□□□ 0.65
CCDC78-201ENST00000293889 A0A1W2PQJ5 194 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 SPTLC1O15269 473 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 CCZ1BP86790 482 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 CCZ1P86791 482 aaPredicted RBP19.07■□□□□ 0.64
CCDC78-201ENST00000293889 GOLGA8FQ08AF8 430 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 GOLGA8DPQ0D2H9 430 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 WDR72Q3MJ13 1102 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 CACNA2D4Q7Z3S7 1137 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 LRRC43Q8N309 656 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 KREMEN1Q96MU8 473 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 EDEM3Q9BZQ6 932 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 NXF1Q9UBU9 619 aaKnown RBP19.07■□□□□ 0.64
CCDC78-201ENST00000293889 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 MYOGP15173 224 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 PNPLA4P41247 253 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 TAF6P49848 677 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 LILRA4P59901 499 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 GCNT1Q02742 428 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 ZNF667Q5HYK9 610 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 C3orf58Q8NDZ4 430 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 BAP1Q92560 729 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 ZNF560Q96MR9 790 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 ARID3AQ99856 593 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 NIF3L1Q9GZT8 377 aa19.07■□□□□ 0.64
CCDC78-201ENST00000293889 TPM1P09493 284 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 RFX1P22670 979 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 ASPAP45381 313 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 OR1G1P47890 313 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 ADKP55263 362 aaKnown RBP19.06■□□□□ 0.64
CCDC78-201ENST00000293889 SMAD3P84022 425 aaKnown RBP19.06■□□□□ 0.64
CCDC78-201ENST00000293889 CUL2Q13617 745 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 RAPGEF1Q13905 1077 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 NYAP1Q6ZVC0 841 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 YME1L1Q96TA2 773 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 STK33Q9BYT3 514 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 PBX4Q9BYU1 374 aa19.06■□□□□ 0.64
CCDC78-201ENST00000293889 YBX2Q9Y2T7 364 aaKnown RBP19.06■□□□□ 0.64
CCDC78-201ENST00000293889 LUC7L2Q9Y383 392 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms