RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 MAMLD1Q13495 774 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 SETDB1Q15047 1291 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 LMBRD2Q68DH5 695 aaPredicted RBP20.33■□□□□ 0.84
LSM12-201ENST00000293406 ANKS1BQ7Z6G8 1248 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 ERICH1Q86X53 443 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 OGFOD1Q8N543 542 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 CEP170P1Q96L14 293 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 C17orf75Q9HAS0 396 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 UBN1Q9NPG3 1134 aa20.33■□□□□ 0.84
LSM12-201ENST00000293406 DSG3P32926 999 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 CETN2P41208 172 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 POLGP54098 1239 aaPredicted RBP20.32■□□□□ 0.84
LSM12-201ENST00000293406 DNAJC3Q13217 504 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 BRDTQ58F21 947 aaPredicted RBP20.32■□□□□ 0.84
LSM12-201ENST00000293406 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.32■□□□□ 0.84
LSM12-201ENST00000293406 MAGEB2O15479 319 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 CFHP08603 1231 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 RPS6P62753 249 aaKnown RBP20.32■□□□□ 0.84
LSM12-201ENST00000293406 TRIM72Q6ZMU5 477 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 TTC25Q96NG3 672 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 MYLK2Q9H1R3 596 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 RAVER2Q9HCJ3 691 aaKnown RBP20.32■□□□□ 0.84
LSM12-201ENST00000293406 PHTF1Q9UMS5 762 aa20.32■□□□□ 0.84
LSM12-201ENST00000293406 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 POC1B-GALNT4F8VUJ3 575 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TLR3O15455 904 aaKnown RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 HLA-DRAP01903 254 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TNNI1P19237 187 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 GCAP28676 217 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 NOMO3P69849 1222 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 NFX1Q12986 1120 aaKnown RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 SPARCL1Q14515 664 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 VSIG1Q86XK7 387 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 FNBP1Q96RU3 617 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 ZNF341Q9BYN7 854 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TRABDQ9H4I3 376 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 BATF3Q9NR55 127 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 SCINQ9Y6U3 715 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 DNALI1O14645 258 aaPredicted RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 PRPF4O43172 522 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■■□ 20.1
LSM12-201ENST00000293406 LIASO43766 372 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 ATP2A2P16615 1042 aaKnown RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 SSTR3P32745 418 aaPredicted RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 ZFYVE27Q5T4F4 411 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 KAZNQ674X7 775 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 SPOPLQ6IQ16 392 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TDRPQ86YL5 185 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 ERP27Q96DN0 273 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 VCPIP1Q96JH7 1222 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 FHDC1Q9C0D6 1143 aaPredicted RBP20.31■□□□□ 0.84
LSM12-201ENST00000293406 KIAA1586Q9HCI6 787 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 KLHL11Q9NVR0 708 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 ZNF148Q9UQR1 794 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 USH1CQ9Y6N9 552 aa20.31■□□□□ 0.84
LSM12-201ENST00000293406 TBC1D12O60347 775 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 ATP5HO75947 161 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 ECM2O94769 699 aaPredicted RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 ASNSP08243 561 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 KRT15P19012 456 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 YARSP54577 528 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 ZACNQ401N2 412 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 PLEKHA7Q6IQ23 1121 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 ABRAQ8N0Z2 381 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 GLIS1Q8NBF1 620 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 DENND1AQ8TEH3 1009 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 SPOCK2Q92563 424 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 ZNF570Q96NI8 536 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 LRRC37BQ96QE4 947 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 RMDN3Q96TC7 470 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 DNPEPQ9ULA0 475 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 GOLGB1Q14789 3259 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 PI4K2BG5E9Z4 385 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 EXTL3O43909 919 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 WFS1O76024 890 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 KRT10P13645 584 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 GNA15P30679 374 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 TDRD10Q5VZ19 366 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 SMC6Q96SB8 1091 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 MAP3K20Q9NYL2 800 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 SMG5Q9UPR3 1016 aaKnown RBP20.3■□□□□ 0.84
LSM12-201ENST00000293406 PCDHB4Q9Y5E5 795 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 PCDHA10Q9Y5I2 948 aa20.3■□□□□ 0.84
LSM12-201ENST00000293406 ZSCAN5DPP0CG00 497 aa20.29■□□□□ 0.84
LSM12-201ENST00000293406 ACO1P21399 889 aaKnown RBP20.29■□□□□ 0.84
LSM12-201ENST00000293406 ARSEP51690 589 aa20.29■□□□□ 0.84
LSM12-201ENST00000293406 CLDN10P78369 228 aa20.29■□□□□ 0.84
LSM12-201ENST00000293406 PKN2Q16513 984 aaKnown RBP20.29■□□□□ 0.84
LSM12-201ENST00000293406 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
LSM12-201ENST00000293406 HP1BP3Q5SSJ5 553 aaPredicted RBP20.29■□□□□ 0.84
LSM12-201ENST00000293406 TMEM270Q6UE05 265 aa20.29■□□□□ 0.84
LSM12-201ENST00000293406 PHF13Q86YI8 300 aaPredicted RBP20.29■□□□□ 0.84
LSM12-201ENST00000293406 UTP4Q969X6 686 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms