RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DRAP1Q14919 205 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 CLUL1Q15846 466 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 ENOX2Q16206 610 aaKnown RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 AMHR2Q16671 573 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 PHLDB3Q6NSJ2 640 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 ZNF668Q96K58 619 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 POP1Q99575 1024 aaKnown RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 RPF1Q9H9Y2 349 aaKnown RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 AJAP1Q9UKB5 411 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 TTC7AQ9ULT0 858 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 PDE4DIPQ5VU43 2346 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 M0QZ92 97 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 KCNK3O14649 394 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 B4GALT5O43286 388 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 GPR32O75388 356 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
CPSF4-201ENST00000292476 BIRC3Q13489 604 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 KIZQ2M2Z5 673 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 DCAF4L1Q3SXM0 396 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 RFFLQ8WZ73 363 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 KRT12Q99456 494 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.96■□□□□ 0.471e-6■■■□□ 19
CPSF4-201ENST00000292476 IMPG2Q9BZV3 1241 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 CDT1Q9H211 546 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 C11orf49Q9H6J7 331 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 EPB41L5Q9HCM4 733 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 C1orf112Q9NSG2 853 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 GTF2IRD1Q9UHL9 959 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 TTLL13PA6NNM8 815 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 TREHO43280 583 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 B4GALT4O60513 344 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 TSPAN1O60635 241 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 IQCF3P0C7M6 154 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 DARSP14868 501 aaKnown RBP17.96■□□□□ 0.47
CPSF4-201ENST00000292476 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-201ENST00000292476 EIF4BP23588 611 aaKnown RBP17.96■□□□□ 0.47
CPSF4-201ENST00000292476 CRYBB1P53674 252 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-201ENST00000292476 GCNT1Q02742 428 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 GUCY2DQ02846 1103 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 PEX26Q7Z412 305 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 OLIG1Q8TAK6 271 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 TAS1R2Q8TE23 839 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 DNAJB3Q8WWF6 145 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 ISCUQ9H1K1 167 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 PDZD7Q9H5P4 517 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 ASB7Q9H672 318 aa17.96■□□□□ 0.47
CPSF4-201ENST00000292476 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 DNM1LO00429 736 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 TNNC2P02585 160 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 PIK3CAP42336 1068 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 HADHBP55084 474 aaKnown RBP17.95■□□□□ 0.46
CPSF4-201ENST00000292476 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-201ENST00000292476 TCEAL1Q15170 157 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 PPP2R5EQ16537 467 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 NOTUMQ6P988 496 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 THNSL1Q8IYQ7 743 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 IQCKQ8N0W5 287 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 PPM1KQ8N3J5 372 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 TSEN2Q8NCE0 465 aaKnown RBP17.95■□□□□ 0.46
CPSF4-201ENST00000292476 ARRDC4Q8NCT1 418 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 HES6Q96HZ4 224 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 ANKRD36BP1Q96IX9 119 aa17.95■□□□□ 0.46
CPSF4-201ENST00000292476 ASGR1P07306 291 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 TBXAS1P24557 533 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 CARSP49589 748 aaKnown RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 SKOR1P84550 965 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 PTPN11Q06124 597 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 KCNA10Q16322 511 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 ZBTB41Q5SVQ8 909 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 GJB7Q6PEY0 223 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 LRRC31Q6UY01 552 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 RUFY4Q6ZNE9 571 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 NT5DC3Q86UY8 548 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 NT5DC4Q86YG4 428 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 LNX1Q8TBB1 728 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 RIN2Q8WYP3 895 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 ZNF516Q92618 1163 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 DPF3Q92784 378 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 PPP1R16BQ96T49 567 aa17.94■□□□□ 0.46
CPSF4-201ENST00000292476 SENP6Q9GZR1 1112 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 TOPORSQ9NS56 1045 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 PACSIN2Q9UNF0 486 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-201ENST00000292476 KBTBD13C9JR72 458 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 RAD51CO43502 376 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 HLA-DRAP01903 254 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 TMEM191BP0C7N4 346 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 HSPA9P38646 679 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms