RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SRRM3A6NNA2 597 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 KRT34O76011 436 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 KLHL2O95198 593 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 FKBP9O95302 570 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 IMPDH2P12268 514 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 JAK3P52333 1124 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 RAB14P61106 215 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 ANGPT1Q15389 498 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 FKBP9P1Q75LS8 142 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PCYOX1LQ8NBM8 494 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 DDHD1Q8NEL9 900 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF556Q9HAH1 456 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 TPD52L2O43399 206 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 SCN3BQ9NY72 215 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PCDHA6Q9UN73 950 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PCDHA8Q9Y5H6 950 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 KRT87PA6NCN2 255 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM72Q6ZMU5 477 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PGBD4Q96DM1 585 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 MAML3Q96JK9 1138 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 CHP1Q99653 195 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 SP110Q9HB58 689 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 HSPBP1Q9NZL4 362 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PDP2Q9P2J9 529 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 FOXP2O15409 715 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 MOCS2O96007 188 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 GYS1P13807 737 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 VHLP40337 213 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 SYCP2LQ5T4T6 812 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 LUZP2Q86TE4 346 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 PRUNE1Q86TP1 453 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 THEM5Q8N1Q8 247 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 DPF2Q92785 391 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 BRD8Q9H0E9 1235 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 ABCC6O95255 1503 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TMEM120BA0PK00 339 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 RASSF9O75901 435 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 SRP72O76094 671 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TCF3P15923 654 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PRELPP51888 382 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PLOD1Q02809 727 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 NME3Q13232 169 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 DCAF4L1Q3SXM0 396 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 AGBL2Q5U5Z8 902 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 FOXR1Q6PIV2 292 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PLEKHA8Q96JA3 519 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 NSMCE4AQ9NXX6 385 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PSMC3IPQ9P2W1 217 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 ABLIM1O14639 778 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 FOXN1O15353 648 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 DLGAP3O95886 979 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 APRTP07741 180 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 CPA2P48052 419 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 RASGRF1Q13972 1273 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 P3H1Q32P28 736 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 WLSQ5T9L3 541 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 KDM7AQ6ZMT4 941 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM69Q86WT6 500 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 HORMAD1Q86X24 394 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 RMDN1Q96DB5 314 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 ZC3H7BQ9UGR2 993 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 C15orf41Q9Y2V0 281 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TOMM70O94826 608 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 ACADSP16219 412 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 ITIH2P19823 946 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TSPY1Q01534 308 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 KCNB1Q14721 858 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 SLC9A5Q14940 896 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 SPDYAQ5MJ70 313 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TTC33Q6PID6 262 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms