RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 AGAP1Q9UPQ3 857 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 BACE2Q9Y5Z0 518 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 TULP1O00294 542 aaPredicted RBP29.01■■■□□ 2.23
SSU72-201ENST00000291386 TEX28O15482 410 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 PTMSP20962 102 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 VAMP7P51809 220 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 NLRP12P59046 1061 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 SKIV2LQ15477 1246 aaKnown RBP29.01■■■□□ 2.23
SSU72-201ENST00000291386 SV2CQ496J9 727 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 CCDC183Q5T5S1 534 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 ANKS3Q6ZW76 656 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 FAM84AQ96KN4 292 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 MTRRQ9UBK8 725 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 CTNND2Q9UQB3 1225 aa29.01■■■□□ 2.23
SSU72-201ENST00000291386 ARHGEF37A1IGU5 675 aa29■■■□□ 2.23
SSU72-201ENST00000291386 ADH1AP07327 375 aa29■■■□□ 2.23
SSU72-201ENST00000291386 EPB41P11171 864 aaKnown RBP29■■■□□ 2.23
SSU72-201ENST00000291386 KRT13P13646 458 aa29■■■□□ 2.23
SSU72-201ENST00000291386 TYMPP19971 482 aa29■■■□□ 2.23
SSU72-201ENST00000291386 DLG4P78352 724 aa29■■■□□ 2.23
SSU72-201ENST00000291386 BFSP1Q12934 665 aa29■■■□□ 2.23
SSU72-201ENST00000291386 PSMD5Q16401 504 aa29■■■□□ 2.23
SSU72-201ENST00000291386 PRSS55Q6UWB4 352 aaPredicted RBP29■■■□□ 2.23
SSU72-201ENST00000291386 DSTYKQ6XUX3 929 aa29■■■□□ 2.23
SSU72-201ENST00000291386 SLC22A17Q8WUG5 538 aa29■■■□□ 2.23
SSU72-201ENST00000291386 HLA-CQ95604 372 aa29■■■□□ 2.23
SSU72-201ENST00000291386 SENP8Q96LD8 212 aa29■■■□□ 2.23
SSU72-201ENST00000291386 RWDD2AQ9UIY3 292 aa29■■■□□ 2.23
SSU72-201ENST00000291386 KPNA7A9QM74 516 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 GLP2RO95838 553 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 C4BPAP04003 597 aaKnown RBP28.99■■■□□ 2.23
SSU72-201ENST00000291386 NDUFV1P49821 464 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 VARS2Q5ST30 1063 aaKnown RBP28.99■■■□□ 2.23
SSU72-201ENST00000291386 C1orf220Q5T0J3 134 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 SCARA3Q6AZY7 606 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 FILIP1Q7Z7B0 1213 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 CLSTN3Q9BQT9 956 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 UBE2ZQ9H832 354 aaPredicted RBP28.99■■■□□ 2.23
SSU72-201ENST00000291386 CLDND1Q9NY35 253 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 HCFC2Q9Y5Z7 792 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 BRWD1Q9NSI6 2320 aa28.99■■■□□ 2.23
SSU72-201ENST00000291386 REV3LO60673 3130 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 LINC01565O15544 149 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 TBC1D4O60343 1298 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 CYP11A1P05108 521 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 KRT19P08727 400 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 KLRC2P26717 231 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 LTBRP36941 435 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 CLCN4P51793 760 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 CT47A1Q5JQC4 288 aaPredicted RBP28.98■■■□□ 2.23
SSU72-201ENST00000291386 VN1R2Q8NFZ6 395 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 EEF2KMTQ96G04 330 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 GDAP2Q9NXN4 497 aa28.98■■■□□ 2.23
SSU72-201ENST00000291386 R3HCC1Q9Y3T6 440 aaKnown RBP28.98■■■□□ 2.23
SSU72-201ENST00000291386 H7C4K7 107 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 OAZ2O95190 189 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 STAU1O95793 577 aaKnown RBP28.97■■■□□ 2.23
SSU72-201ENST00000291386 CST3P01034 146 aaPredicted RBP28.97■■■□□ 2.23
SSU72-201ENST00000291386 SRGAP2BP0DMP2 458 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 ODC1P11926 461 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 ZACNQ401N2 412 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 C15orf39Q6ZRI6 1047 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 OXCT2Q9BYC2 517 aaPredicted RBP28.97■■■□□ 2.23
SSU72-201ENST00000291386 PRDM6Q9NQX0 595 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 TMEM63CQ9P1W3 806 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 DACH1Q9UI36 760 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 DSEQ9UL01 958 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 TSC2P49815 1807 aa28.97■■■□□ 2.23
SSU72-201ENST00000291386 COL6A3P12111 3177 aa28.96■■■□□ 2.23
SSU72-201ENST00000291386 STX17P56962 302 aa28.96■■■□□ 2.23
SSU72-201ENST00000291386 MYO1EQ12965 1108 aa28.96■■■□□ 2.23
SSU72-201ENST00000291386 DPCR1Q3MIW9 517 aa28.96■■■□□ 2.23
SSU72-201ENST00000291386 TDRD10Q5VZ19 366 aaKnown RBP28.96■■■□□ 2.23
SSU72-201ENST00000291386 CASP10Q92851 521 aa28.96■■■□□ 2.23
SSU72-201ENST00000291386 METTL14Q9HCE5 456 aaKnown RBP28.96■■■□□ 2.23
SSU72-201ENST00000291386 PLXNA3P51805 1871 aa28.95■■■□□ 2.23
SSU72-201ENST00000291386 MTCL1Q9Y4B5 1905 aaKnown RBP28.95■■■□□ 2.23
SSU72-201ENST00000291386 CYB561D2O14569 222 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 RPL17P18621 184 aaKnown RBP28.95■■■□□ 2.22
SSU72-201ENST00000291386 ERCC5P28715 1186 aaPredicted RBP28.95■■■□□ 2.22
SSU72-201ENST00000291386 ATICP31939 592 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 GTF2H1P32780 548 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 YWHAHQ04917 246 aaPredicted RBP28.95■■■□□ 2.22
SSU72-201ENST00000291386 KLHL40Q2TBA0 621 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 SLC8B1Q6J4K2 584 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 ZNF280DQ6N043 979 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 LILRA6Q6PI73 481 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 SV2AQ7L0J3 742 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 FRMD5Q7Z6J6 570 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 HPDLQ96IR7 371 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 MED15Q96RN5 788 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 CLEC1BQ9P126 229 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 THEGQ9P2T0 379 aa28.95■■■□□ 2.22
SSU72-201ENST00000291386 TBX10O75333 385 aa28.94■■■□□ 2.22
SSU72-201ENST00000291386 TRPC3Q13507 836 aa28.94■■■□□ 2.22
SSU72-201ENST00000291386 RAB33AQ14088 237 aa28.94■■■□□ 2.22
SSU72-201ENST00000291386 RSPO2Q6UXX9 243 aaPredicted RBP28.94■■■□□ 2.22
SSU72-201ENST00000291386 HDAC7Q8WUI4 952 aa28.94■■■□□ 2.22
SSU72-201ENST00000291386 VRTNQ9H8Y1 702 aa28.94■■■□□ 2.22
SSU72-201ENST00000291386 FBXL5Q9UKA1 691 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms