RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 IL12RB1P42701 662 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 GPC5P78333 572 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 CAV1Q03135 178 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 SGO1Q5FBB7 561 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 GPATCH4Q5T3I0 446 aaKnown RBP3.72□□□□□ -1.81
MACF1-201ENST00000289893 SWT1Q5T5J6 900 aaKnown RBP3.72□□□□□ -1.81
MACF1-201ENST00000289893 OR6B3Q8NGW1 331 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 SLC7A5P2Q9GIP4 190 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 TMEM206Q9H813 350 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 VIPAS39Q9H9C1 493 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 DBNDD1Q9H9R9 158 aa3.72□□□□□ -1.81
MACF1-201ENST00000289893 NPHP4O75161 1426 aaPredicted RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 LGALS16A8MUM7 142 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 CCDC22O60826 627 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 RASSF9O75901 435 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 RESTQ13127 1097 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 DCPSQ96C86 337 aaKnown RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 PGBD4Q96DM1 585 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 AIFM3Q96NN9 605 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ZNF556Q9HAH1 456 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ANKRD31Q8N7Z5 1873 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 PODXLO00592 558 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 SLC16A4O15374 487 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 KCNN4O15554 427 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 TSC22D2O75157 780 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ASMTLO95671 621 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 SCRN3Q0VDG4 424 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ZCWPW2Q504Y3 356 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 RESP18Q5W5W9 173 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 CC2D1AQ6P1N0 951 aaPredicted RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 CNKSR1Q969H4 720 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 EME1Q96AY2 570 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 TMEM165Q9HC07 324 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 MAP3K20Q9NYL2 800 aaKnown RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 PEAK1Q9H792 1746 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ATP6V1B1P15313 513 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 CDH6P55285 790 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 CCNA1P78396 465 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 RUNDC3AQ59EK9 446 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 LAYNQ6UX15 382 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 ELOA2Q8IYF1 753 aaPredicted RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 AHI1Q8N157 1196 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 CLEC4FQ8N1N0 589 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 AGGF1Q8N302 714 aaeCLIP3.71□□□□□ -1.81
MACF1-201ENST00000289893 CEP95Q96GE4 821 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 PUS3Q9BZE2 481 aaKnown RBP3.71□□□□□ -1.81
MACF1-201ENST00000289893 VCPKMTQ9H867 229 aa3.71□□□□□ -1.81
MACF1-201ENST00000289893 N4BP2Q86UW6 1770 aaPredicted RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 USP27XA6NNY8 438 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 RNF103O00237 685 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 RALBP11234 206 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 BCAR1P56945 870 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 NME3Q13232 169 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 SLC27A3Q5K4L6 730 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 CDKL3Q8IVW4 592 aaPredicted RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 TTC13Q8NBP0 860 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 RMDN1Q96DB5 314 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 RNPC3Q96LT9 517 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 TLR7Q9NYK1 1049 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 BLOC1S6Q9UL45 172 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 STAP1Q9ULZ2 295 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 KIF13BQ9NQT8 1826 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 DDX60Q8IY21 1712 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 TP53BP1Q12888 1972 aaPredicted RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 SDC4P31431 198 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 COBLL1Q53SF7 1204 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 MEI1Q5TIA1 1274 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 CCDC137Q6PK04 289 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 CCT8L2Q96SF2 557 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 GREM2Q9H772 168 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 CCSER2Q9H7U1 834 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 DCCP43146 1447 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 RFX7Q2KHR2 1363 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 LARGE1O95461 756 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 PMS2P54278 862 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 TP53BP2Q13625 1128 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 KLHL12Q53G59 568 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 POTEGQ6S5H5 508 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 TMEM270Q6UE05 265 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 GATAD2AQ86YP4 633 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 ZNF564Q8TBZ8 553 aaPredicted RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 GRAMD1AQ96CP6 724 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 THAP9Q9H5L6 903 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 FANCEQ9HB96 536 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 C20orf96Q9NUD7 363 aaPredicted RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 FAM32AQ9Y421 112 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 EIF3HO15372 352 aaKnown RBP eCLIP3.71□□□□□ -1.827e-7■■■■□ 21.1
MACF1-201ENST00000289893 PSAPP07602 524 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 ACTR2P61160 394 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 PDAP1Q13442 181 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 ANKRD40Q6AI12 368 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 FGD2Q7Z6J4 655 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 C3orf20Q8ND61 904 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 ASIC4Q96FT7 647 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 VMP1Q96GC9 406 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 GORASP1Q9BQQ3 440 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 THTPAQ9BU02 230 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 CAPN10Q9HC96 672 aa3.71□□□□□ -1.82
MACF1-201ENST00000289893 ZCCHC17Q9NP64 241 aaKnown RBP3.71□□□□□ -1.82
MACF1-201ENST00000289893 GJB4Q9NTQ9 266 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms