RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FPGSQ05932 587 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 NCOA4Q13772 614 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 HLTFQ14527 1009 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 CDR2LQ86X02 465 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 VWCEQ96DN2 955 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM175Q9BSA9 504 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 STK33Q9BYT3 514 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 OSBPL7Q9BZF2 842 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 RNF19AQ9NV58 838 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 PCDHB7Q9Y5E2 793 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 PIRO00625 290 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 TRPC3Q13507 836 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 SEZ6Q53EL9 994 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 UBR7Q8N806 425 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 OR5B17Q8NGF7 314 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 PPP1R12CQ9BZL4 782 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 CCDC172P0C7W6 258 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 UCHL3P15374 230 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 RAG1P15918 1043 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 KRT9P35527 623 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 MYO1EQ12965 1108 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 PDXDC1Q6P996 788 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 C1orf127Q8N9H9 656 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 DBF4BQ8NFT6 615 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 TAS1R2Q8TE23 839 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 FERMT1Q9BQL6 677 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 CYP3A43Q9HB55 503 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 ST7Q9NRC1 585 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 H0YHG0 523 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 PTGESO14684 152 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 OSTNP61366 133 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 MEA1Q16626 185 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 SV2CQ496J9 727 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 C9orf57Q5W0N0 161 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 GLB1LQ6UWU2 654 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 LIMS2Q7Z4I7 341 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 BAP1Q92560 729 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 ACBD3Q9H3P7 528 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 TRMT1Q9NXH9 659 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 CNTN6Q9UQ52 1028 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 LUC7L2Q9Y383 392 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 KIAA1671Q9BY89 1806 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 ARHGEF37A1IGU5 675 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 THP07101 528 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 KCNJ6P48051 423 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 SLC8A3P57103 927 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 TCTN1Q2MV58 587 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 FAM117BQ6P1L5 589 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 GDAP2Q9NXN4 497 aa9.03□□□□□ -0.96
PTPDC1-201ENST00000288976 AKAP5P24588 427 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 RAPGEF1Q13905 1077 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 GSTCDQ8NEC7 633 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 SCLYQ96I15 445 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 ZMAT2Q96NC0 199 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 ALS2CR12Q96Q35 445 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 XYLT2Q9H1B5 865 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 ABHD10Q9NUJ1 306 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 AIPL1Q9NZN9 384 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 STK39Q9UEW8 545 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 SIX4Q9UIU6 781 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 BZW2Q9Y6E2 419 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 GFPT2O94808 682 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 KRT5P13647 590 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 SLC9A1P19634 815 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 MLH1P40692 756 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 CCL23P55773 120 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 DSC1Q08554 894 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF699Q32M78 642 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 NOMO2Q5JPE7 1267 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 TC2NQ8N9U0 490 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 PHOSPHO2Q8TCD6 241 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 CASD1Q96PB1 797 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 AARSP49588 968 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 KLK7P49862 253 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 NOP14P78316 857 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 CUL2Q13617 745 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 CLLU1OSQ5K130 101 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 IQCEQ6IPM2 695 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 TXLNBQ8N3L3 684 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 RC3H2Q9HBD1 1191 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-201ENST00000288976 ITGB3P05106 788 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 FERP16591 822 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 CASP14P31944 242 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 PRKCIP41743 596 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms