RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 INPP5DQ92835 1189 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 KAT5Q92993 513 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 DDX27Q96GQ7 796 aaKnown RBP11.01□□□□□ -0.65
SKA1-201ENST00000285116 KCNK9Q9NPC2 374 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
SKA1-201ENST00000285116 CDH16O75309 829 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 STX2P32856 288 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 RTP1P59025 263 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 KLC1Q07866 573 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 MGAT5Q09328 741 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 SETDB1Q15047 1291 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 SH3TC2Q8TF17 1288 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 MROH7Q68CQ1 1323 aa11□□□□□ -0.65
SKA1-201ENST00000285116 NDC80O14777 642 aa11□□□□□ -0.65
SKA1-201ENST00000285116 CLDN3O15551 220 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ADSSP30520 456 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ALDH3A1P30838 453 aa11□□□□□ -0.65
SKA1-201ENST00000285116 SFNP31947 248 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ECE1P42892 770 aa11□□□□□ -0.65
SKA1-201ENST00000285116 JAK3P52333 1124 aa11□□□□□ -0.65
SKA1-201ENST00000285116 SNX1Q13596 522 aa11□□□□□ -0.65
SKA1-201ENST00000285116 TKFCQ3LXA3 575 aa11□□□□□ -0.65
SKA1-201ENST00000285116 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
SKA1-201ENST00000285116 WASHC2DQ5SRD0 308 aa11□□□□□ -0.65
SKA1-201ENST00000285116 CGB2Q6NT52 195 aa11□□□□□ -0.65
SKA1-201ENST00000285116 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
SKA1-201ENST00000285116 MTHFD1LQ6UB35 978 aa11□□□□□ -0.65
SKA1-201ENST00000285116 TRIM72Q6ZMU5 477 aa11□□□□□ -0.65
SKA1-201ENST00000285116 MAEAQ7L5Y9 396 aa11□□□□□ -0.65
SKA1-201ENST00000285116 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
SKA1-201ENST00000285116 KATNAL2Q8IYT4 538 aa11□□□□□ -0.65
SKA1-201ENST00000285116 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
SKA1-201ENST00000285116 RDH13Q8NBN7 331 aa11□□□□□ -0.65
SKA1-201ENST00000285116 TMEM161BQ8NDZ6 487 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
SKA1-201ENST00000285116 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
SKA1-201ENST00000285116 DDX23Q9BUQ8 820 aaKnown RBP11□□□□□ -0.65
SKA1-201ENST00000285116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11□□□□□ -0.65
SKA1-201ENST00000285116 NINJ2Q9NZG7 142 aa11□□□□□ -0.65
SKA1-201ENST00000285116 TBX20Q9UMR3 447 aa11□□□□□ -0.65
SKA1-201ENST00000285116 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
SKA1-201ENST00000285116 CYP1A1P04798 512 aaPredicted RBP11□□□□□ -0.65
SKA1-201ENST00000285116 ATF2P15336 505 aa11□□□□□ -0.65
SKA1-201ENST00000285116 YWHABP31946 246 aaKnown RBP11□□□□□ -0.65
SKA1-201ENST00000285116 BPIFB4P59827 614 aa11□□□□□ -0.65
SKA1-201ENST00000285116 SLC30A10Q6XR72 485 aa11□□□□□ -0.65
SKA1-201ENST00000285116 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
SKA1-201ENST00000285116 OGFOD1Q8N543 542 aa11□□□□□ -0.65
SKA1-201ENST00000285116 CFAP61Q8NHU2 1237 aa11□□□□□ -0.65
SKA1-201ENST00000285116 FAM151AQ8WW52 585 aa11□□□□□ -0.65
SKA1-201ENST00000285116 PHACTR1Q9C0D0 580 aa11□□□□□ -0.65
SKA1-201ENST00000285116 VCXQ9H320 206 aa11□□□□□ -0.65
SKA1-201ENST00000285116 RAB20Q9NX57 234 aa11□□□□□ -0.65
SKA1-201ENST00000285116 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
SKA1-201ENST00000285116 RPL26L1Q9UNX3 145 aaKnown RBP11□□□□□ -0.65
SKA1-201ENST00000285116 MYPNQ86TC9 1320 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 SPDYE5A6NIY4 337 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 TISP43B9A030 160 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
SKA1-201ENST00000285116 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
SKA1-201ENST00000285116 BRAFP15056 766 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CREB1P16220 341 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 GARTP22102 1010 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 MAPK4P31152 587 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 KCNJ1P48048 391 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 ITGA8P53708 1063 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 MAP3K10Q02779 954 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CYP24A1Q07973 514 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 STRN3Q13033 797 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CCDC25Q86WR0 208 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 VSIG1Q86XK7 387 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CCDC89Q8N998 374 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 GDAP1Q8TB36 358 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 DNAJC9Q8WXX5 260 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 NUDCD1Q96RS6 583 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 SYT15Q9BQS2 421 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 NKIRAS1Q9NYS0 192 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 UMODL1Q5DID0 1318 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 PRPF4O43172 522 aaKnown RBP eCLIP10.99□□□□□ -0.65
SKA1-201ENST00000285116 PROSCO94903 275 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 LMNAP02545 664 aaKnown RBP10.99□□□□□ -0.65
SKA1-201ENST00000285116 PDHA1P08559 390 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CHKAP35790 457 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 POLGP54098 1239 aaPredicted RBP10.99□□□□□ -0.65
SKA1-201ENST00000285116 PSMC5P62195 406 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 TMEM154Q6P9G4 183 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 ZCCHC9Q8N567 271 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms