RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SGMS1Q86VZ5 419 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 C3orf20Q8ND61 904 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 COLEC11Q9BWP8 271 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NEK6Q9HC98 313 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DMAP1Q9NPF5 467 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 THG1LQ9NWX6 298 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DTNAQ9Y4J8 743 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MAP3K4Q9Y6R4 1608 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ARHGEF40Q8TER5 1519 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TRPC5OSA6NMA1 111 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 STX7O15400 261 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TBC1D4O60343 1298 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RASSF9O75901 435 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 POLBP06746 335 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NR3C2P08235 984 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 HSPA13P48723 471 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PIGHQ14442 188 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 GNASQ5JWF2 1037 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF677Q86XU0 584 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 GLYCTKQ8IVS8 523 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ATL2Q8NHH9 583 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 EEF2KMTQ96G04 330 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TGS1Q96RS0 853 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 LNPEPQ9UIQ6 1025 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 KPNA6O60684 536 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RPN2P04844 631 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CKMP06732 381 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ERVK-10P10266 1014 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 HOXB8P17481 243 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MCAMP43121 646 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 VSNL1P62760 191 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PTRHD1Q6GMV3 140 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MRNIPQ6NTE8 343 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ANKRD13AQ8IZ07 590 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SNX31Q8N9S9 440 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MCOLN3Q8TDD5 553 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RMDN2Q96LZ7 410 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RIT2Q99578 217 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 C1QTNF7Q9BXJ2 289 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 BCL2L12Q9HB09 334 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RAVER2Q9HCJ3 691 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SRP68Q9UHB9 627 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PLAAQ9Y263 795 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NR2E3Q9Y5X4 410 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SPATA31A3Q5VYP0 1347 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CCL15-CCL14A0A0B4J2E2 113 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CFAP73A6NFT4 308 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF839A8K0R7 811 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 F5H6K3 240 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PRKAB2O43741 272 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 H2AFYO75367 372 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZBTB7AO95365 584 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 HPGDP15428 266 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TAF6P49848 677 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SULT1E1P49888 294 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ATXN3P54252 364 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 KLRC3Q07444 240 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PEX6Q13608 980 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CCL15Q16663 113 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 HIBCHQ6NVY1 386 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 BRINP3Q76B58 766 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DDX17Q92841 729 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TMEM237Q96Q45 408 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 STK33Q9BYT3 514 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 FRMD8P1Q9BZ68 369 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SNX9Q9Y5X1 595 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ERVK-7P63135 1459 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 H7C1W4 665 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 SERPIND1P05546 499 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 MLNP12872 115 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 PPP2R1BP30154 601 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 YWHABP31946 246 aaKnown RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 RENBPP51606 427 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 KRR1Q13601 381 aaKnown RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 SLC45A4Q5BKX6 768 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 C16orf89Q6UX73 402 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 PID1Q7Z2X4 250 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF438Q7Z4V0 828 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 GPRASP2Q96D09 838 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 ARHGEF26Q96DR7 871 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC126Q96EE4 140 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 HINFPQ9BQA5 517 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 FAM167BQ9BTA0 163 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 GPR63Q9BZJ6 419 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 DIABLOQ9NR28 239 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 CACNA2D2Q9NY47 1150 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 STMN3Q9NZ72 180 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 TRPM5Q9NZQ8 1165 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 PCDHB12Q9Y5F1 795 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 C2orf81A6NN90 581 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 MEFVO15553 781 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 GUCY2CP25092 1073 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM28Q13263 835 aaKnown RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 SLFNL1Q499Z3 407 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 DDX42Q86XP3 938 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 UBE2OQ9C0C9 1292 aaKnown RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC90BQ9GZT6 254 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 EPS8L2Q9H6S3 715 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 PAK5Q9P286 719 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms