RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 CLCN1P35523 988 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 ASPAP45381 313 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 C1orf53Q5VUE5 145 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 KIAA1328Q86T90 577 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 NOP9Q86U38 636 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 FTHL17Q9BXU8 183 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 LZTFL1Q9NQ48 299 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 ADAMTS1Q9UHI8 967 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 LRFN2Q9ULH4 789 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 REXO2Q9Y3B8 237 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 SNX9Q9Y5X1 595 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 A0A087X0T9 212 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 SSU72P8A0A1W2PR75 194 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 TRIM43BA6NCK2 446 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 ZNF263O14978 683 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 FAM228BP0C875 321 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 RAG1P15918 1043 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 IGFBP6P24592 240 aaPredicted RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 GSTCDQ8NEC7 633 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 TAF4BQ92750 862 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 TRIM43Q96BQ3 446 aaPredicted RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 AGPAT1Q99943 283 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
XRCC4-201ENST00000282268 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
XRCC4-201ENST00000282268 UPP2O95045 317 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 MMEP08473 750 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 P4HA1P13674 534 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 ITGB8P26012 769 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 PRKCIP41743 596 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 GATMP50440 423 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 PDE6CP51160 858 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
XRCC4-201ENST00000282268 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
XRCC4-201ENST00000282268 APBB2Q92870 758 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
XRCC4-201ENST00000282268 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 PDCL3Q9H2J4 239 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 PCDHA13Q9Y5I0 950 aa12.18□□□□□ -0.46
XRCC4-201ENST00000282268 ANO9A1A5B4 782 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 DDX3XO00571 662 aaKnown RBP eCLIP12.17□□□□□ -0.46
XRCC4-201ENST00000282268 PODXLO00592 558 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 SPTLC1O15269 473 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 THAP12O43422 761 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 CSF2RAP15509 400 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 CYP11B1P15538 503 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 MAGEA1P43355 309 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 KCNJ6P48051 423 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 CLCNKBP51801 687 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 KRT83P78385 493 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
XRCC4-201ENST00000282268 ASTE1Q2TB18 679 aaPredicted RBP12.17□□□□□ -0.46
XRCC4-201ENST00000282268 PAN2Q504Q3 1202 aaKnown RBP12.17□□□□□ -0.46
XRCC4-201ENST00000282268 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 DPH6Q7L8W6 267 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 ZNF560Q96MR9 790 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 RALGAPA2Q2PPJ7 1873 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 CITO14578 2027 aa12.17□□□□□ -0.46
XRCC4-201ENST00000282268 PIRO00625 290 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 CCP110O43303 1012 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 EOMESO95936 686 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 ABL1P00519 1130 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 TIMP1P01033 207 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 CXCL10P02778 98 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 ACRP10323 421 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 CD19P15391 556 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 CHRNB2P17787 502 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 CYP3A5P20815 502 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 GNA15P30679 374 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 TAF6P49848 677 aa12.16□□□□□ -0.46
XRCC4-201ENST00000282268 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
XRCC4-201ENST00000282268 FAM189BP81408 668 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms