RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 CABYRO75952 493 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 FTCDO95954 541 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 GNA15P30679 374 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 GTF2H1P32780 548 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 CDC42EP1Q00587 391 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 PTK7Q13308 1070 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 NAA30Q147X3 362 aaPredicted RBP14.25□□□□□ -0.13
ACER3-201ENST00000278544 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 NAA35Q5VZE5 725 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 AGMOQ6ZNB7 445 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
ACER3-201ENST00000278544 EIF3CQ99613 913 aaKnown RBP14.25□□□□□ -0.13
ACER3-201ENST00000278544 DNM1LO00429 736 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 IL18RAPO95256 599 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 ACAT1P24752 427 aaKnown RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 HNRNPH3P31942 346 aaKnown RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 MGAT3Q09327 533 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 ASTE1Q2TB18 679 aaPredicted RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 NYAP1Q6ZVC0 841 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 CYFIP2Q96F07 1278 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 PTGESO14684 152 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 SPTLC1O15269 473 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 GALCP54803 685 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 PRMT2P55345 433 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 ETF1P62495 437 aaKnown RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 TNNC1P63316 161 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 CLDN10P78369 228 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 DAB2IPQ5VWQ8 1189 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 LRRC8DQ7L1W4 858 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 RTN4RL1Q86UN2 441 aaPredicted RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 CCDC170Q8IYT3 715 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 HINFPQ9BQA5 517 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 EDEM3Q9BZQ6 932 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 THAP2Q9H0W7 228 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 NUCKS1Q9H1E3 243 aaKnown RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 HIPK3Q9H422 1215 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 NBNO60934 754 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 VAV2P52735 878 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 OR6B3Q8NGW1 331 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 ARHGEF26Q96DR7 871 aa14.24□□□□□ -0.13
ACER3-201ENST00000278544 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
ACER3-201ENST00000278544 ARL5CA6NH57 179 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 TLR3O15455 904 aaKnown RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 KRT86O43790 486 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 CHRNB2P17787 502 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 CASQ1P31415 396 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 FAM126BQ8IXS8 530 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 HEXIM2Q96MH2 286 aaKnown RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 NT5C1B-RDH14C9J2C7 533 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 FECHP22830 423 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 CLCNKBP51801 687 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ACOT1Q86TX2 421 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 CPNE8Q86YQ8 564 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 LRRN4CLQ8ND94 238 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 UBA3Q8TBC4 463 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 TFAP2BQ92481 460 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ZBTB9Q96C00 473 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 MRPL45Q9BRJ2 306 aaKnown RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 ASB7Q9H672 318 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ST7Q9NRC1 585 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 SMARCAL1Q9NZC9 954 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 PHF24Q9UPV7 400 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ASPAP45381 313 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
ACER3-201ENST00000278544 SURF1Q15526 300 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 TCTN1Q2MV58 587 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 BEST2Q8NFU1 509 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 KIF18AQ8NI77 898 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ERVK-5Q9HDB9 667 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 UNC80Q8N2C7 3258 aa14.23□□□□□ -0.13
ACER3-201ENST00000278544 ACRP10323 421 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 ACO1P21399 889 aaKnown RBP14.22□□□□□ -0.13
ACER3-201ENST00000278544 RBP5P82980 135 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 FMO1Q01740 532 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 TJP2Q9UDY2 1190 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
ACER3-201ENST00000278544 EN2P19622 333 aaPredicted RBP14.22□□□□□ -0.13
ACER3-201ENST00000278544 SCP2P22307 547 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 TMEM174Q8WUU8 243 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 SECISBP2LQ93073 1101 aaKnown RBP14.22□□□□□ -0.13
ACER3-201ENST00000278544 IQCDQ96DY2 449 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 ZSWIM1Q9BR11 485 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 TRIM7Q9C029 511 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 PLEKHA4Q9H4M7 779 aa14.22□□□□□ -0.13
ACER3-201ENST00000278544 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 B3GAT3O94766 335 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 H2AFZP0C0S5 128 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 ATF7P17544 494 aaPredicted RBP14.21□□□□□ -0.13
ACER3-201ENST00000278544 LMO2P25791 158 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 BRCC3P46736 316 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 GCNT1Q02742 428 aa14.21□□□□□ -0.13
ACER3-201ENST00000278544 RNASELQ05823 741 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms