RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SLC6A11P48066 632 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 DCAF7P61962 342 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 ST5P78524 1137 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CFAP58Q5T655 872 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 STEAP3Q658P3 488 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 STYK1Q6J9G0 422 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 LILRA6Q6PI73 481 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 RFX8Q6ZV50 586 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CEP57L1Q8IYX8 460 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CARNMT1Q8N4J0 409 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 MARCH10Q8NA82 808 aaPredicted RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 PLEKHO2Q8TD55 490 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 N4BP2L2Q92802 583 aaPredicted RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 RADILQ96JH8 1075 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CFAP53Q96M91 514 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 MPHOSPH8Q99549 860 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 BAG1Q99933 345 aaPredicted RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 NUP62CLQ9H1M0 184 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 CNTD2Q9H8S5 307 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 RXFP1Q9HBX9 757 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 DMRT3Q9NQL9 472 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 PLSCR4Q9NRQ2 329 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 ABCF3Q9NUQ8 709 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 SPTLC3Q9NUV7 552 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 SAMD15Q9P1V8 674 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 TBK1Q9UHD2 729 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 MBD1Q9UIS9 605 aaPredicted RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 SLC13A4Q9UKG4 626 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 L1RE1Q9UN81 338 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 KCTD3Q9Y597 815 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 NPFFR2Q9Y5X5 522 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 X6R8D5 127 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 DISP2A7MBM2 1401 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 PLCH1Q4KWH8 1693 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 A0A087X0M5 115 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 A0A1B0GX30 115 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 A6NLC8 198 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 TISP43B9A030 160 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 B9A039 149 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 H3BML4 177 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 GAS7O60861 476 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ZBED4O75132 1171 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 POU2F2P09086 479 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ATP1A3P13637 1013 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ATP6V1B1P15313 513 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PEX2P28328 305 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 HOXC9P31274 260 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 GRK3P35626 688 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 NPTX2P47972 431 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 CASP5P51878 434 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 LINC00310P59036 64 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 OCRLQ01968 901 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 GUCY1A3Q02108 690 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PAK1Q13153 545 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 SPARCL1Q14515 664 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PARP10Q53GL7 1025 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 FAM47CQ5HY64 1035 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 CC2D1BQ5T0F9 858 aaKnown RBP5.13□□□□□ -1.59
CD44-202ENST00000278385 RNF220Q5VTB9 566 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 TCERG1LQ5VWI1 586 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 MBLAC2Q68D91 279 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ISM2Q6H9L7 571 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PGBD2Q6P3X8 592 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 CNKSR3Q6P9H4 555 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 LBX2Q6XYB7 198 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ETV3LQ6ZN32 361 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 MCM10Q7L590 875 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 SDCCAG8Q86SQ7 713 aaPredicted RBP5.13□□□□□ -1.59
CD44-202ENST00000278385 DDX53Q86TM3 631 aaKnown RBP5.13□□□□□ -1.59
CD44-202ENST00000278385 GALNT13Q8IUC8 556 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PPP1R35Q8TAP8 253 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PHOSPHO1Q8TCT1 267 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ASB12Q8WXK4 309 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 DPF3Q92784 378 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 GTPBP4Q9BZE4 634 aaKnown RBP5.13□□□□□ -1.59
CD44-202ENST00000278385 CCDC68Q9H2F9 335 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PCDHB4Q9Y5E5 795 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 NRAPQ86VF7 1730 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 ABCA3Q99758 1704 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 OVOS2A0A0G2JMS6 1433 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 OVOS2A0A0J9YW53 1432 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 BCL9O00512 1426 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 OVOS2Q6IE36 1432 aa5.13□□□□□ -1.59
CD44-202ENST00000278385 PHRF1Q9P1Y6 1649 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 B4DLN1 442 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 H7C0S8 307 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ADAMTS3O15072 1205 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 NCK2O43639 380 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 PPP1R11O60927 126 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 MAFO75444 373 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 KRT1P04264 644 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 POLBP06746 335 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 LCP1P13796 627 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 VEGFAP15692 232 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 TECP42680 631 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 MRE11P49959 708 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 CDR1P51861 262 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms