RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 INTS2Q9H0H0 1204 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 DDX18Q9NVP1 670 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 TFCP2L1Q9NZI6 479 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 LAMB2P55268 1798 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 LY75O60449 1722 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ROBO3Q96MS0 1386 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 FRMPD2Q68DX3 1309 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 USP17L5A8MUK1 530 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ZWINTO95229 277 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 SMIM18P0DKX4 95 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 CDK4P11802 303 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ATF2P15336 505 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 FMO5P49326 533 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 DLG1Q12959 904 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 CBX3Q13185 183 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 MTMR2Q13614 643 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 STAT4Q14765 748 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 KIF22Q14807 665 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ZRSR2Q15696 482 aaKnown RBP9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 EAPPQ56P03 285 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ACAD11Q709F0 780 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 TREML1Q86YW5 311 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 ST13P4Q8IZP2 240 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC35B4Q969S0 331 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 USP29Q9HBJ7 922 aa9.71□□□□□ -0.85
HMGCLL1-201ENST00000274901 BRWD3Q6RI45 1802 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 GTPBP10A4D1E9 387 aaKnown RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 PDXKO00764 312 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 FSCN2O14926 492 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 SPOPO43791 374 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 ATP9BO43861 1147 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 HNRNPCL1O60812 293 aaKnown RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 SUPT3HO75486 399 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 ZNF189O75820 626 aaPredicted RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 KRT15P19012 456 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 YY1P25490 414 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 TM4SF1P30408 202 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 MAGEA4P43358 317 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 RAP1GDS1P52306 607 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 TBL3Q12788 808 aaKnown RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 GRM2Q14416 872 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 EFTUD2Q15029 972 aaKnown RBP eCLIP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 PCNX4Q63HM2 1172 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 LPCAT4Q643R3 524 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 DNAJC14Q6Y2X3 702 aaPredicted RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 GLIS1Q8NBF1 620 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 TGFBRAP1Q8WUH2 860 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 PPP2R3CQ969Q6 453 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 CLMNQ96JQ2 1002 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 OLFM3Q96PB7 478 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 CCDC28BQ9BUN5 200 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 TRAIPQ9BWF2 469 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 TMEM120AQ9BXJ8 343 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 WNT8AQ9H1J5 351 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 INIPQ9NRY2 104 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 ANKFY1Q9P2R3 1169 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 SLC17A7Q9P2U7 560 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 ANGPTL2Q9UKU9 493 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 PCDHGB4Q9UN71 923 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 PCDHGB5Q9Y5G0 923 aa9.71□□□□□ -0.86
HMGCLL1-201ENST00000274901 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 E5RJQ4 531 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 CALUO43852 315 aaPredicted RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 RAD21O60216 631 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 GTF2H1P32780 548 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 ADCY7P51828 1080 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 AQP4P55087 323 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 GPC5P78333 572 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 HNRNPDQ14103 355 aaKnown RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 HSF5Q4G112 596 aaPredicted RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 IZUMO3Q5VZ72 239 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 FBXL19Q6PCT2 694 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 PDSS2Q86YH6 399 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 ARHGEF19Q8IW93 802 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 METTL25Q8N6Q8 603 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 KAT5Q92993 513 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 SMC6Q96SB8 1091 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 KLF6Q99612 283 aaPredicted RBP9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 DCLK3Q9C098 648 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 NMUR2Q9GZQ4 415 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 ARHGEF38Q9NXL2 777 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 NDE1Q9NXR1 346 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 SLC7A8Q9UHI5 535 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 PCDHA12Q9UN75 941 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 PLA2G4CQ9UP65 541 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 MYO3BQ8WXR4 1341 aa9.7□□□□□ -0.86
HMGCLL1-201ENST00000274901 ESYT2A0FGR8 921 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms