RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 YY1P25490 414 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 USH1GQ495M9 461 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 CCDC137Q6PK04 289 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 TTC7BQ86TV6 843 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 COL4A3BPQ9Y5P4 624 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 QSER1Q2KHR3 1735 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 C2orf71A6NGG8 1288 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 FAM47DPA6NHR8 397 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 RASA4BC9J798 803 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 RASA4O43374 803 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 TFAP2AP05549 437 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 H2AFZP0C0S5 128 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 SMARCA1P28370 1054 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 EPS15P42566 896 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 NONOQ15233 471 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■■■□ 25.4
CTDSP1-201ENST00000273062 NADK2Q4G0N4 442 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 PPP1R21Q6ZMI0 780 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 H2AFVQ71UI9 128 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 ZBED8Q8IZ13 594 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 ZFP28Q8NHY6 868 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 KRT35Q92764 455 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 CYLDQ9NQC7 956 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 NDE1Q9NXR1 346 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 ANGPTL2Q9UKU9 493 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 PCDHGB4Q9UN71 923 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 PCDHGB5Q9Y5G0 923 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 KANSL1LA0AUZ9 987 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 DDTLA6NHG4 134 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 TRAF5O00463 557 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 TTLL1O95922 423 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 LDHAP00338 332 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 TFPTP0C1Z6 253 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 ATP5DP30049 168 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 GALCP54803 685 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 AQP4P55087 323 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 BTKQ06187 659 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC35G2Q8TBE7 412 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 RUNDC3BQ96NL0 473 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 PANX3Q96QZ0 392 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 SAR1AQ9NR31 198 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 NENFQ9UMX5 172 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 TMED5Q9Y3A6 229 aa16.61■□□□□ 0.25
CTDSP1-201ENST00000273062 MYOCOSA0A1B0GUC4 107 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC5A2P31639 672 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 NAA20P61599 178 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 COG7P83436 770 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 TMED2Q15363 201 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 AOC3Q16853 763 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 LPCAT4Q643R3 524 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 FBXL19Q6PCT2 694 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 RASSF3Q86WH2 238 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 SYCE1Q8N0S2 351 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 OR6Y1Q8NGX8 325 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 DQX1Q8TE96 717 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 C2CD2LO14523 706 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 EDIL3O43854 480 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 ADAM23O75077 832 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 TECP42680 631 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 SERPINB8P50452 374 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 IGBP1P78318 339 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 ACAP1Q15027 740 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 UBE2SQ16763 222 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 RIPOR1Q6ZS17 1223 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 SLX4Q8IY92 1834 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 GJA10Q969M2 543 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 RBM38Q9H0Z9 239 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
CTDSP1-201ENST00000273062 ADCY3O60266 1144 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 ZBED4O75132 1171 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 GAS8O95995 478 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 PGM1P36871 562 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 C10orf76Q5T2E6 689 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 RNF111Q6ZNA4 994 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 PDSS2Q86YH6 399 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 GUF1Q8N442 669 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 GRIP2Q9C0E4 1043 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 A0A0G2JND7 137 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms