RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 TCP1P17987 556 aaKnown RBP12.96□□□□□ -0.33
SDE2-201ENST00000272091 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.33
SDE2-201ENST00000272091 MRPS6P82932 125 aaKnown RBP12.96□□□□□ -0.33
SDE2-201ENST00000272091 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 SERINC5Q86VE9 423 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 CPNE8Q86YQ8 564 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 TFAP2BQ92481 460 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
SDE2-201ENST00000272091 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
SDE2-201ENST00000272091 CHRNA1P02708 482 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 AXLP30530 894 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 DNA2P51530 1060 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 CDH8P55286 799 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 NOMO3P69849 1222 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 CENPCQ03188 943 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 SESTD1Q86VW0 696 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.34
SDE2-201ENST00000272091 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.34
SDE2-201ENST00000272091 TAF4BQ92750 862 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 HES6Q96HZ4 224 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.34
SDE2-201ENST00000272091 HMGCRP04035 888 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 BPIFB4P59827 614 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 PTP4A2Q12974 167 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 TAF2Q6P1X5 1199 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 PASD1Q8IV76 773 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 TUBGCP4Q9UGJ1 667 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 TSKSQ9UJT2 592 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 DDX3YO15523 660 aaKnown RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 RECQL4O94761 1208 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 AKAP5P24588 427 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 C2orf54Q08AI8 447 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 IFI16Q16666 785 aaKnown RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 C2CD6Q53TS8 623 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 NAA35Q5VZE5 725 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 DAAM2Q86T65 1068 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 MCOLN2Q8IZK6 566 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 ZNF606Q8WXB4 792 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 ZNF394Q53GI3 561 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
SDE2-201ENST00000272091 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 PNKPQ96T60 521 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 PLEKHA5Q9HAU0 1116 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 GTF3C4Q9UKN8 822 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 AGAP1Q9UPQ3 857 aa12.95□□□□□ -0.34
SDE2-201ENST00000272091 CLSTN1O94985 981 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 ZNF653Q96CK0 615 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
SDE2-201ENST00000272091 THAP12O43422 761 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 MAP2K2P36507 400 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 XKR4Q5GH76 650 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 CD302Q8IX05 232 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 DERAQ9Y315 318 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 TRPV2Q9Y5S1 764 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 ATICP31939 592 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 RAD23BP54727 409 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 ORC1Q13415 861 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 C11orf63Q6NUN7 778 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 GPR161Q8N6U8 529 aaKnown RBP12.94□□□□□ -0.34
SDE2-201ENST00000272091 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
SDE2-201ENST00000272091 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
SDE2-201ENST00000272091 CKAP4Q07065 602 aaKnown RBP12.93□□□□□ -0.34
SDE2-201ENST00000272091 RPS6KA1Q15418 735 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 HPDLQ96IR7 371 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 APOL6Q9BWW8 343 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 PARD6BQ9BYG5 372 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 IPPQ9Y573 584 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 NME7Q9Y5B8 376 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 RPAINQ86UA6 219 aa12.93□□□□□ -0.34
SDE2-201ENST00000272091 FAXDC2Q96IV6 333 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms