RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ARRDC4Q8NCT1 418 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 ARHGEF26Q96DR7 871 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 HPDLQ96IR7 371 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 TLR10Q9BXR5 811 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 THAP2Q9H0W7 228 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
TPM1-201ENST00000267996 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 SAR1BQ9Y6B6 198 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 DYNC1I1O14576 645 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 CAND2O75155 1236 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 ABCB4P21439 1286 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 AKAP5P24588 427 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 GPC5P78333 572 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 WDR72Q3MJ13 1102 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 FBXO47Q5MNV8 452 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 TWF2Q6IBS0 349 aaKnown RBP17.49■□□□□ 0.39
TPM1-201ENST00000267996 SLC35G2Q8TBE7 412 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
TPM1-201ENST00000267996 SDCBP2Q9H190 292 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
TPM1-201ENST00000267996 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
TPM1-201ENST00000267996 NXF1Q9UBU9 619 aaKnown RBP17.49■□□□□ 0.39
TPM1-201ENST00000267996 TSKSQ9UJT2 592 aa17.49■□□□□ 0.39
TPM1-201ENST00000267996 GPR182O15218 404 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 TADA3O75528 432 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 MTA2O94776 668 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 CLSTN1O94985 981 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 NOP2P46087 812 aaKnown RBP17.48■□□□□ 0.39
TPM1-201ENST00000267996 MEI1Q5TIA1 1274 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 RHOT2Q8IXI1 618 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 BEST2Q8NFU1 509 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
TPM1-201ENST00000267996 UBQLN1Q9UMX0 589 aaKnown RBP17.48■□□□□ 0.39
TPM1-201ENST00000267996 PHF24Q9UPV7 400 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 SMIM28A0A1B0GU29 152 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 A0A1W2PQ45 241 aaPredicted RBP17.48■□□□□ 0.39
TPM1-201ENST00000267996 A0A1W2PQY0 241 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 CYP1A2P05177 515 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 P4HA1P13674 534 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 CD58P19256 250 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 ZNF606Q8WXB4 792 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 TRAIPQ9BWF2 469 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 SMYD3Q9H7B4 428 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 GTF3C4Q9UKN8 822 aa17.48■□□□□ 0.39
TPM1-201ENST00000267996 THAP12O43422 761 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 CYP3A5P20815 502 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 CENPCQ03188 943 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 DSC3Q14574 896 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 CEP112Q8N8E3 955 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 MNS1Q8NEH6 495 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 WHAMMQ8TF30 809 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
TPM1-201ENST00000267996 ZSWIM1Q9BR11 485 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 OSGEPQ9NPF4 335 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 FAM105AQ9NUU6 356 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 PARP2Q9UGN5 583 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
TPM1-201ENST00000267996 A0A0U1RQG5 324 aaPredicted RBP17.46■□□□□ 0.39
TPM1-201ENST00000267996 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 CD4P01730 458 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
TPM1-201ENST00000267996 CFHP08603 1231 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 PAEPP09466 180 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 TCP1P17987 556 aaKnown RBP17.46■□□□□ 0.39
TPM1-201ENST00000267996 CDH8P55286 799 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 NOMO3P69849 1222 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
TPM1-201ENST00000267996 LPIN1Q14693 890 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 C9orf57Q5W0N0 161 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 PPP1R2P3Q6NXS1 205 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
TPM1-201ENST00000267996 SYCE1Q8N0S2 351 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 TTC39CQ8N584 583 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 USP38Q8NB14 1042 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 SH3TC2Q8TF17 1288 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 CYFIP2Q96F07 1278 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 KLK14Q9P0G3 267 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 PADI3Q9ULW8 664 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 PCDHGC3Q9UN70 934 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 COG5Q9UP83 839 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 STXBP5LQ9Y2K9 1186 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 SCN1AP35498 2009 aa17.46■□□□□ 0.39
TPM1-201ENST00000267996 PIRO00625 290 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 XPOTO43592 962 aaKnown RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 NCK2O43639 380 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 BUB1BO60566 1050 aaPredicted RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 SRGAP2O75044 1071 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms