RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SALL4Q9UJQ4 1053 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 CPSF3Q9UKF6 684 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 KIAA0100Q14667 2235 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 UMODL1Q5DID0 1318 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 MROH7Q68CQ1 1323 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 SYNJ2BP-COX16A0A087WUM0 186 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 SMIM35A0A1B0GVV1 85 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 KBTBD13C9JR72 458 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 PJA2O43164 708 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CTIFO43310 598 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 HEXIM1O94992 359 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 COMTP21964 271 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 ADORA2BP29275 332 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CA8P35219 290 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 VPS41P49754 854 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 RWDD2BP57060 319 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 JAM2P57087 298 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 HTRA3P83110 453 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CDO1Q16878 200 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CCDC25Q86WR0 208 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 UBA3Q8TBC4 463 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 MAK16Q9BXY0 300 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 NXF3Q9H4D5 531 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 STARD7Q9NQZ5 370 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 COX16Q9P0S2 106 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 GTF3C4Q9UKN8 822 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 PTPN22Q9Y2R2 807 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 MYH10P35580 1976 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 SEPT4O43236 478 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CALB1P05937 261 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 DARSP14868 501 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 RGS7P49802 495 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 PAK2Q13177 524 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 BRD3Q15059 726 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 PAPD7Q5XG87 772 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 HDXQ7Z353 690 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 ZNF677Q86XU0 584 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 MORC4Q8TE76 937 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 NT5C1AQ9BXI3 368 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 HEMGNQ9BXL5 484 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 TLR10Q9BXR5 811 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 DDX47Q9H0S4 455 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 IFT122Q9HBG6 1241 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 HMX1Q9NP08 348 aaPredicted RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 MIF4GDA9UHW6 222 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 TSPAN1O60635 241 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 PIGRP01833 764 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 IFFO1Q0D2I5 559 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 SNX1Q13596 522 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 SNX17Q15036 470 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 KCNA10Q16322 511 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 HADHQ16836 314 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 MORN1Q5T089 497 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CYP4A22Q5TCH4 519 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CRELD2Q6UXH1 353 aaPredicted RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 TRIB2Q92519 343 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 ZNF560Q96MR9 790 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 CELF4Q9BZC1 486 aaKnown RBP9.91□□□□□ -0.82
SSR3-201ENST00000265044 MIS12Q9H081 205 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 UVRAGQ9P2Y5 699 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 ASIC3Q9UHC3 531 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 COQ4Q9Y3A0 265 aa9.91□□□□□ -0.82
SSR3-201ENST00000265044 F2P00734 622 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 CD4P01730 458 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ZNF865P0CJ78 1059 aaPredicted RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 PSMA2P25787 234 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 PAN2Q504Q3 1202 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 C1orf220Q5T0J3 134 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 RUFY4Q6ZNE9 571 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 CD302Q8IX05 232 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 KRT222Q8N1A0 295 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 C18orf8Q96DM3 657 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 BCCIPQ9P287 314 aaKnown RBP eCLIP9.9□□□□□ -0.82
SSR3-201ENST00000265044 IGKV6-21A0A0C4DH24 114 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ESYT3A0FGR9 886 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 LRRD1A4D1F6 860 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 CAPN9O14815 690 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 GPR182O15218 404 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ACTN2P35609 894 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 FMO1Q01740 532 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 TRIM32Q13049 653 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 CALCOCO2Q13137 446 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ASTE1Q2TB18 679 aaPredicted RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 ACOT1Q86TX2 421 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 APPL2Q8NEU8 664 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 RNPC3Q96LT9 517 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 NGRNQ9NPE2 291 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 PARVAQ9NVD7 372 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 NOC2LQ9Y3T9 749 aaKnown RBP9.9□□□□□ -0.82
SSR3-201ENST00000265044 EVPLQ92817 2033 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms