RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 ZSWIM1Q9BR11 485 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 CCDC77Q9BR77 488 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 RMI1Q9H9A7 625 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 ARL8BQ9NVJ2 186 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 NINJ2Q9NZG7 142 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 DNAJC12Q9UKB3 198 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 SCN9AQ15858 1988 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 RAD21O60216 631 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 OPHN1O60890 802 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 HAUS5O94927 633 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 GCNT3O95395 438 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 FMO5P49326 533 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 KLC3Q6P597 504 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 ZBTB8BQ8NAP8 495 aaPredicted RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.88□□□□□ -0.19
NUP54-201ENST00000264883 CRYGNQ8WXF5 182 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 ABTB1Q969K4 478 aaPredicted RBP13.88□□□□□ -0.19
NUP54-201ENST00000264883 HAUS1Q96CS2 278 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 NSL1Q96IY1 281 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 FNBP1Q96RU3 617 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 NPHS2Q9NP85 383 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
NUP54-201ENST00000264883 TMEM221A6NGB7 291 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 TMEM110-MUSTN1A8MSY1 372 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ATP9BO43861 1147 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 RNASEH1O60930 286 aaKnown RBP13.87□□□□□ -0.19
NUP54-201ENST00000264883 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 SPATA31C1P0DKV0 1188 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ITIH2P19823 946 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
NUP54-201ENST00000264883 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 DENND1AQ8TEH3 1009 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ZNF653Q96CK0 615 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ASIC3Q9UHC3 531 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 GRID1Q9ULK0 1009 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 CHRNB2P17787 502 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ARHGAP4P98171 946 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 KRT17Q04695 432 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 SULT2A1Q06520 285 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 STAT4Q14765 748 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 RINLQ6ZS11 566 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 ZNF398Q8TD17 642 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 GJA10Q969M2 543 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
NUP54-201ENST00000264883 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
NUP54-201ENST00000264883 SMIM31A0A1B0GVY4 71 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 BCRP11274 1271 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 ANPEPP15144 967 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 AMPD1P23109 780 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 CRABP2P29373 138 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 STAT3P40763 770 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 MYBPC2Q14324 1141 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 ZNF554Q86TJ5 538 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
NUP54-201ENST00000264883 SNF8Q96H20 258 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.86□□□□□ -0.19
NUP54-201ENST00000264883 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 PCDHA1Q9Y5I3 950 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
NUP54-201ENST00000264883 TGFB1I1O43294 461 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 MTA2O94776 668 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 TROVE2P10155 538 aaKnown RBP eCLIP13.86□□□□□ -0.19
NUP54-201ENST00000264883 PYGMP11217 842 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 CIITAP33076 1130 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 CETN2P41208 172 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 CASP4P49662 377 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 RFX8Q6ZV50 586 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 ACAD11Q709F0 780 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 PRUNE1Q86TP1 453 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 SATL1Q86VE3 508 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 TTLL6Q8N841 843 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 MAML1Q92585 1016 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 PTTG2Q9NZH5 202 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 DCTN4Q9UJW0 460 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 PAIP2BQ9ULR5 123 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms