RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ARHGEF3Q9NR81 526 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-201ENST00000263856 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 ALCAMQ13740 583 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 STAT4Q14765 748 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 NUDCD1Q96RS6 583 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 CHKBQ9Y259 395 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 MAPK13O15264 365 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 ENTPD5O75356 428 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 FDX1P10109 184 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 POLGP54098 1239 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-201ENST00000263856 GAD2Q05329 585 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 RIPK1Q13546 671 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 SLC1A5Q15758 541 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 CCDC6Q16204 474 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-201ENST00000263856 USP37Q86T82 979 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 IWS1Q96ST2 819 aa13.12□□□□□ -0.31
CHMP3-201ENST00000263856 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 PROSCO94903 275 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 KRT4P19013 534 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 SSTR1P30872 391 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 GPC3P51654 580 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ZBTB16Q05516 673 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 MFSD7Q6UXD7 560 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 MYBPC2Q14324 1141 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ADGRA3Q8IWK6 1321 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 UTP4Q969X6 686 aaKnown RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-201ENST00000263856 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 OSBPL1AQ9BXW6 950 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 ZFP69BQ9UJL9 534 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 GRID1Q9ULK0 1009 aa13.11□□□□□ -0.31
CHMP3-201ENST00000263856 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CCNE2O96020 404 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 WNT7BP56706 349 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 PSMC5P62195 406 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CAV1Q03135 178 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 ANO5Q75V66 913 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 USH1CQ9Y6N9 552 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CFAP69A5D8W1 941 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CCNHP51946 323 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CYP4A22Q5TCH4 519 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 NLRX1Q86UT6 975 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 TRABD2AQ86V40 505 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 PCNTO95613 3336 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 C2orf71A6NGG8 1288 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 F8VP50 259 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 ADRA1DP25100 572 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 CCNG2Q16589 344 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 BBS9Q3SYG4 887 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 TBC1D10AQ9BXI6 508 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 METTL5Q9NRN9 209 aaKnown RBP13.1□□□□□ -0.31
CHMP3-201ENST00000263856 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 PRKAG3Q9UGI9 489 aa13.1□□□□□ -0.31
CHMP3-201ENST00000263856 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms