RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 STK24Q9Y6E0 443 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 C2orf71A6NGG8 1288 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 CFLARO15519 480 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 SNX3O60493 162 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 CFHP08603 1231 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 GNAT1P11488 350 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TMPRSS15P98073 1019 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 ORC1Q13415 861 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TRPC3Q13507 836 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 CRYMQ14894 314 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 CNGA2Q16280 664 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 PRAMEF18Q5VWM3 479 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TATDN1Q6P1N9 297 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TTC8Q8TAM2 541 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 NAF1Q96HR8 494 aaKnown RBP14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 ADAM7Q9H2U9 754 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 QTRT2Q9H974 415 aaKnown RBP14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TXNDC16Q9P2K2 825 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 GABBR1Q9UBS5 961 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 MCM8Q9UJA3 840 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 TELO2Q9Y4R8 837 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 GCLCP48506 637 aaPredicted RBP14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 COG7P83436 770 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 FBXL13Q8NEE6 735 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 LMO3Q8TAP4 145 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 ATXN2LQ8WWM7 1075 aaKnown RBP14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 DMAC2Q9NW81 257 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 INPP5FQ9Y2H2 1132 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
TUBGCP3-201ENST00000261965 LOC100653049A0A140TA62 436 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 KRT34O76011 436 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 HAUS5O94927 633 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 RARGP13631 454 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 NCF2P19878 526 aaPredicted RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 MMP13P45452 471 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 EML3Q32P44 896 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 TAF1BQ53T94 588 aaPredicted RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 YTHDF3Q7Z739 585 aaKnown RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 FAM228AQ86W67 206 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 RFX6Q8HWS3 928 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 DCLK2Q8N568 766 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 CFAP57Q96MR6 1250 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 KDM4CQ9H3R0 1056 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 NEU2Q9Y3R4 380 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 MYH11P35749 1972 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 ALDH18A1P54886 795 aaKnown RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 TFAMQ00059 246 aaKnown RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 BTKQ06187 659 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 TEKT4Q8WW24 435 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 DNAJC9Q8WXX5 260 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 FAM47DPA6NHR8 397 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 CDH16O75309 829 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 CSDE1O75534 798 aaKnown RBP14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 CCND1P24385 295 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 RFC5P40937 340 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 MAGEA4P43358 317 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 PEX5P50542 639 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 SWSAP1Q6NVH7 229 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 SLC30A9Q6PML9 568 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 FITM2Q8N6M3 262 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 ATP6V0A4Q9HBG4 840 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 SMYD2Q9NRG4 433 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 CHMP2BQ9UQN3 213 aa14.8□□□□□ -0.04
TUBGCP3-201ENST00000261965 H3BRJ5 948 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 CAPN9O14815 690 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 SKIP12755 728 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 ANXA13P27216 316 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 NPTX2P47972 431 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 RPS6P62753 249 aaKnown RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 C1orf146Q5VVC0 180 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 BZW1Q7L1Q6 419 aaKnown RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 OLIG1Q8TAK6 271 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 ZNF317Q96PQ6 595 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 THTPAQ9BU02 230 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 MYLK2Q9H1R3 596 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.79□□□□□ -0.045e-7■■■■■ 38.3
TUBGCP3-201ENST00000261965 ARFIP2P53365 341 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 SPP2Q13103 211 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 TKFCQ3LXA3 575 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 TMEM143Q96AN5 459 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 IDI2Q9BXS1 227 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 CCDC78A2IDD5 438 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 VIL1P09327 827 aaKnown RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 MPP2Q14168 576 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 PKN2Q16513 984 aaKnown RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 C1orf220Q5T0J3 134 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 NLRX1Q86UT6 975 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 PGM2Q96G03 612 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 ZBTB45Q96K62 511 aaPredicted RBP14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 PACSIN3Q9UKS6 424 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 LAMB2P55268 1798 aa14.79□□□□□ -0.04
TUBGCP3-201ENST00000261965 MAP3K7O43318 606 aa14.78□□□□□ -0.04
TUBGCP3-201ENST00000261965 NUDT17P0C025 328 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms