RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PDXKO00764 312 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 TADA3O75528 432 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 AVPR1AP37288 418 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 KLHL38Q2WGJ6 581 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 RAB6BQ9NRW1 208 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 XPO7Q9UIA9 1087 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 RAP1GDS1P52306 607 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 KAT2BQ92831 832 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 TRIM54Q9BYV2 358 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 DIS3Q9Y2L1 958 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 EPB42P16452 691 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 IL25Q9H293 177 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 TXLNGQ9NUQ3 528 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 FGFR1OP2Q9NVK5 253 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 MARCOQ9UEW3 520 aaPredicted RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 PDHXO00330 501 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 MSH4O15457 936 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 B3GAT3O94766 335 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 POMCP01189 267 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 MAP2K2P36507 400 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 MORF4L2Q15014 288 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 EFTUD2Q15029 972 aaKnown RBP eCLIP12.77□□□□□ -0.36
SPG11-201ENST00000261866 KYAT1Q16773 422 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 CHST13Q8NET6 341 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.36
SPG11-201ENST00000261866 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 KCNB1Q14721 858 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 SBK1Q52WX2 424 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 FAXCQ5TGI0 409 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 HIBCHQ6NVY1 386 aaPredicted RBP12.77□□□□□ -0.36
SPG11-201ENST00000261866 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.36
SPG11-201ENST00000261866 ZFATQ9P243 1243 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 GYG2O15488 501 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 SERPINI1Q99574 410 aa12.77□□□□□ -0.36
SPG11-201ENST00000261866 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 HBP1O60381 514 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 SUPT3HO75486 399 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 CD4P01730 458 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 AP3M2P53677 418 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 CDH18Q13634 790 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 LAMC2Q13753 1193 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 MTMR12Q9C0I1 747 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 hCG_2014768A0A024R1R8 64 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.37
SPG11-201ENST00000261866 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
SPG11-201ENST00000261866 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
SPG11-201ENST00000261866 SNX17Q15036 470 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 MED15Q96RN5 788 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 SHCBP1LQ9BZQ2 653 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 SETD4Q9NVD3 440 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 CPS1P31327 1500 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 NFIBO00712 420 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 MAGEB2O15479 319 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 PDIA6Q15084 440 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 TDRD10Q5VZ19 366 aaKnown RBP12.77□□□□□ -0.37
SPG11-201ENST00000261866 LRRC8EQ6NSJ5 796 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 ACOT1Q86TX2 421 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 KLF6Q99612 283 aaPredicted RBP12.77□□□□□ -0.37
SPG11-201ENST00000261866 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 PKP3Q9Y446 797 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.37
SPG11-201ENST00000261866 MYO1DO94832 1006 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 BRAFP15056 766 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 DPYDQ12882 1025 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 PDIA5Q14554 519 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 VMP1Q96GC9 406 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 DNAJC7Q99615 494 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 CCDC188H7C350 402 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 RFX3P48380 749 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 RFFLQ8WZ73 363 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 PYGLP06737 847 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 GALCP54803 685 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 ADGRA1Q86SQ6 560 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 DCP1BQ8IZD4 617 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 C1orf131Q8NDD1 294 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 CD274Q9NZQ7 290 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 NDUFS3O75489 264 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 TAF11Q15544 211 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 C1orf146Q5VVC0 180 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 GPR63Q9BZJ6 419 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 GPR75-ASB3A0A0A6YYF3 556 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms