RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 PCMTD2Q9NV79 361 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 CHCHD3Q9NX63 227 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 XPO7Q9UIA9 1087 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 WEE2P0C1S8 567 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 SNRNP35Q16560 246 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 PRELID2Q8N945 189 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 PPP1R36Q96LQ0 422 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 CCDC138Q96M89 665 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 HAUS8Q9BT25 410 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 PPCSQ9HAB8 311 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 RASA2Q15283 850 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 EPHA7Q15375 998 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 CHI3L2Q15782 390 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
SREBF1-201ENST00000261646 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
SREBF1-201ENST00000261646 FAM96AQ9H5X1 160 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 TAS2R14Q9NYV8 317 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 E7ENQ6 273 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 TBX3O15119 743 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 EIF3DO15371 548 aaKnown RBP eCLIP17.04■□□□□ 0.32
SREBF1-201ENST00000261646 APRTP07741 180 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 TYK2P29597 1187 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 ZBTB17Q13105 803 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 PCNX4Q63HM2 1172 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 TBC1D16Q8TBP0 767 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 RAB6BQ9NRW1 208 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 ARMCX1Q9P291 453 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 RNF103-CHMP3A0A140T963 221 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 PIK3R5Q8WYR1 880 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 BTBD10Q9BSF8 475 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 GANQ9H2C0 597 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 LRRC4BQ9NT99 713 aa17.04■□□□□ 0.32
SREBF1-201ENST00000261646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.04■□□□□ 0.326e-12■■■■■ 51.1
SREBF1-201ENST00000261646 TRIM49D1C9J1S8 452 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 PSMC1P62191 440 aaKnown RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 NFX1Q12986 1120 aaKnown RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 COG2Q14746 738 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 C1orf228Q6PIY5 440 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 NDUFAF2Q8N183 169 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 DDX50Q9BQ39 737 aaKnown RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 RRM1P23921 792 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 PRKCIP41743 596 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 IRF2BP2Q7Z5L9 587 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 ZC3H7BQ9UGR2 993 aaKnown RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 AIM2O14862 343 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 GZMAP12544 262 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 ATP6V1C1P21283 382 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 STX1BP61266 288 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 PRAMEP78395 509 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 ROR1Q01973 937 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 ACAD10Q6JQN1 1059 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 C11orf63Q6NUN7 778 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 C4orf32Q8N8J7 132 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 CCDC97Q96F63 343 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 COA1Q9GZY4 146 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 TRPC5Q9UL62 973 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 LZTS1Q9Y250 596 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 INO80B-WBP1J3KQ70 363 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 CST8O60676 142 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 ALG3Q92685 438 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 INO80BQ9C086 356 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-201ENST00000261646 SSX2IPQ9Y2D8 614 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 INPP5FQ9Y2H2 1132 aa17.03■□□□□ 0.32
SREBF1-201ENST00000261646 UBE4BO95155 1302 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 AFF2P51816 1311 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 GOLGA8QA0A0J9YX86 632 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 GOLGA8OA6NCC3 632 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 GOLGA8NF8WBI6 632 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 MED7O43513 233 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 CASP5P51878 434 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 CDH6P55285 790 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 BCAR1P56945 870 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 KCNA1Q09470 495 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 FITM2Q8N6M3 262 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms