RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 BAIAP2L1Q9UHR4 511 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 PHF24Q9UPV7 400 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 PCDHGC5Q9Y5F6 944 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 EPN1Q9Y6I3 576 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 ANP32DO95626 131 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 ADRB2P07550 413 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 KCTD16Q68DU8 428 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 TSHZ1Q6ZSZ6 1077 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 CBWD2Q8IUF1 395 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 SLC35C1Q96A29 364 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 STAMBPL1Q96FJ0 436 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 ALS2CR12Q96Q35 445 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 GCOM2Q9BZD3 368 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 AGO2Q9UKV8 859 aaKnown RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 CNTNAP2Q9UHC6 1331 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 A0A0B4J269 797 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 KIAA0391O15091 583 aaKnown RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 CLDN3O15551 220 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 SRGAP2O75044 1071 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 CTCFP49711 727 aaPredicted RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 PTPN11Q06124 597 aaPredicted RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 BFSP1Q12934 665 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 CCDC38Q502W7 563 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 FKBP15Q5T1M5 1219 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 CFAP58Q5T655 872 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 TCERG1LQ5VWI1 586 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 INTS8Q75QN2 995 aaKnown RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZNF572Q7Z3I7 529 aaPredicted RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 TSEN2Q8NCE0 465 aaKnown RBP20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 WNT8BQ93098 351 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 MSTO1Q9BUK6 570 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 STARD7Q9NQZ5 370 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 ABLIM1O14639 778 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 NDUFA10O95299 355 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 PROZP22891 400 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 MAGEA8P43361 318 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 KCNH2Q12809 1159 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 MTA1Q13330 715 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 TMEM132AQ24JP5 1023 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 CACNA2D3Q8IZS8 1091 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 IQCKQ8N0W5 287 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 ATP6V1G3Q96LB4 118 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 FAM213AQ9BRX8 229 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 YIPF3Q9GZM5 350 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 OGDHLQ9ULD0 1010 aa20.19■□□□□ 0.82
COL4A3BP-201ENST00000261415 A0A1W2PQC6 194 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 LAMB3Q13751 1172 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 BLMHQ13867 455 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 TCHPQ9BT92 498 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 PTPRHQ9HD43 1115 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 PAPOLBQ9NRJ5 636 aaKnown RBP20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 KRT86O43790 486 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 EXTL3O43909 919 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 TSPAN1O60635 241 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 KRT13P13646 458 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 DARSP14868 501 aaKnown RBP20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 EIF4BP23588 611 aaKnown RBP20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 MPZL3Q6UWV2 235 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 CCDC155Q8N6L0 562 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZFAND2BQ8WV99 257 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 KIAA1586Q9HCI6 787 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 TRMT13Q9NUP7 481 aaKnown RBP20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 TNFSF13BQ9Y275 285 aa20.18■□□□□ 0.82
COL4A3BP-201ENST00000261415 RALGAPA2Q2PPJ7 1873 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 KRT14P02533 472 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 AFPP02771 609 aaKnown RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 HARSP12081 509 aaKnown RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 ARF4P18085 180 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 FGFR4P22455 802 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 VAV2P52735 878 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 KRT83P78385 493 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 MRPS6P82932 125 aaKnown RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 MCL1Q07820 350 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 SNX17Q15036 470 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZBTB33Q86T24 672 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 RSPH3Q86UC2 560 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 CDR2LQ86X02 465 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 TMEM40Q8WWA1 233 aa20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 EZH1Q92800 747 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-201ENST00000261415 C5orf60A6NFR6 353 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 A6NHS1 94 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 LDHAP00338 332 aaKnown RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 RPLP2P05387 115 aaKnown RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 TRIM49P0CI25 452 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 TRIM49CP0CI26 452 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 ACOT2P49753 483 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 CRYBB1P53674 252 aaPredicted RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 C2orf54Q08AI8 447 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 PKN2Q16513 984 aaKnown RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZNF568Q3ZCX4 644 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 CCDC122Q5T0U0 273 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 EEF1DP3Q658K8 133 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 SLC43A3Q8NBI5 491 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 SEC16BQ96JE7 1060 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms